RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 KIAA1024LP59773 190 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 MRPS21P82921 87 aaKnown RBP10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 FADDQ13158 208 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 GAB1Q13480 694 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 ZNF385BQ569K4 471 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 OTUD3Q5T2D3 398 aaPredicted RBP10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 TTC23Q5W5X9 447 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 ZDHHC21Q8IVQ6 265 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 OR2L8Q8NGY9 312 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 ASPSCR1Q9BZE9 553 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 C8orf33Q9H7E9 229 aaPredicted RBP10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 NCKAP1Q9Y2A7 1128 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 HEBP2Q9Y5Z4 205 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 A0A087WXM4 84 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 ADAM23O75077 832 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 KLHL18O94889 574 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 KLF8O95600 359 aaPredicted RBP10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 SNAP29O95721 258 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 KLK1P06870 262 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 GNAO1P09471 354 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 RXRGP48443 463 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 LRRC23Q53EV4 343 aaPredicted RBP10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 LMNTD1Q8N9Z9 388 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 C11orf65Q8NCR3 313 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 OR52N2Q8NGI0 321 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 MSLNLQ96KJ4 702 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 CAMK1GQ96NX5 476 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 GABARAPL1Q9H0R8 117 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 TM9SF3Q9HD45 589 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 THEGQ9P2T0 379 aa10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.34□□□□□ -0.75
PHACTR4-204ENST00000493669 FESP07332 822 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ATP6V1B1P15313 513 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 RPL10P27635 214 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TPP2P29144 1249 aaPredicted RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 DCTP40126 519 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ABATP80404 500 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 DLX2Q07687 328 aaPredicted RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 CNPY1Q3B7I2 92 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 UAP1L1Q3KQV9 507 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 NADK2Q4G0N4 442 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ZC3H12BQ5HYM0 836 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 SHQ1Q6PI26 577 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 PIWIL3Q7Z3Z3 882 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ADAMTS16Q8TE57 1224 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 NRBF2Q96F24 287 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ACAT2Q9BWD1 397 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 OSGEPL1Q9H4B0 414 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 SPASTQ9UBP0 616 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 DMTF1Q9Y222 760 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 WDR37Q9Y2I8 494 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 CFAP20Q9Y6A4 193 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 COL4A2P08572 1712 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3DA0A087WVF3 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3IA0A087WXS9 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3EA0A087X179 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3KA0A087X1G2 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3FA6NER0 549 aaPredicted RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3LB9A6J9 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 PLPP1O14494 284 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 CAPN5O15484 640 aaPredicted RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 AHCYL1O43865 530 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ZNF682O95780 498 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 EGFP01133 1207 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 FUCA1P04066 466 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3HP0C7X1 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ALDH3B2P48448 385 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TRA2BP62995 288 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 PRDX1Q06830 199 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 MLF2Q15773 248 aaPredicted RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 CCNYL2Q5T2Q4 361 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3GQ6DHY5 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3CQ6IPX1 549 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TBC1D3Q8IZP1 549 aaPredicted RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 METTL25Q8N6Q8 603 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ANKRD53Q8N9V6 530 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 LINC01555Q8NAE3 123 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 KLK6Q92876 244 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 FBXL20Q96IG2 436 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 MIEF1Q9NQG6 463 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 CUEDC1Q9NWM3 386 aaPredicted RBP10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 ADPRHL2Q9NX46 363 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 CLDND1Q9NY35 253 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 TAS2R9Q9NYW1 312 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 C3orf18Q9UK00 162 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 SUFUQ9UMX1 484 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 COMMD3-BMI1R4GMX3 469 aa10.33□□□□□ -0.76
PHACTR4-204ENST00000493669 SAP18O00422 153 aaKnown RBP10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 E2F6O75461 281 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 CLEC3AO75596 197 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 KRT75O95678 551 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 FABP3P05413 133 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 IL3P08700 152 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 DDCP20711 480 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 COL9A1P20849 921 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 ARFIP1P53367 373 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 HBA1P69905 142 aa10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 GRSF1Q12849 480 aaKnown RBP eCLIP10.32□□□□□ -0.76
PHACTR4-204ENST00000493669 OR2T5Q6IEZ7 315 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms