RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GSTA5Q7RTV2 222 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 SNX20Q7Z614 316 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 GRASPQ7Z6J2 395 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 FAM71AQ8IYT1 594 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 MICU2Q8IYU8 434 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 RBFAQ8N0V3 343 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 GTPBP8Q8N3Z3 284 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 BCORP1Q8N888 145 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 NETO2Q8NC67 525 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 PDPRQ8NCN5 879 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CCDC197Q8NCU1 140 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 PDZD8Q8NEN9 1154 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 DNAAF1Q8NEP3 725 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 STXBP6Q8NFX7 210 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CADM4Q8NFZ8 388 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 OR51L1Q8NGJ5 315 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 KCNG3Q8TAE7 436 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 FAM110DQ8TAY7 271 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 SPPL2AQ8TCT8 520 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 PANK1Q8TE04 598 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 GAB3Q8WWW8 586 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 BORCS5Q969J3 196 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CPNE4Q96A23 557 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 AP2M1Q96CW1 435 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 ASB9Q96DX5 294 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CERS2Q96G23 380 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 SLC46A1Q96NT5 459 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 PRRT1Q99946 306 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 OMDQ99983 421 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 MAPKAP1Q9BPZ7 522 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CLSTN3Q9BQT9 956 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 ADI1Q9BV57 179 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 GSDMCQ9BYG8 508 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 TM6SF2Q9BZW4 377 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 ATG10Q9H0Y0 220 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 SIRPDQ9H106 197 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 PIGUQ9H490 435 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 PLK3Q9H4B4 646 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 COG4Q9H9E3 785 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CHMP1AQ9HD42 196 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 MYOZ1Q9NP98 299 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CHST7Q9NS84 486 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 PIGVQ9NUD9 493 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 GFOD1Q9NXC2 390 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 CLDND1Q9NY35 253 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 NLGN3Q9NZ94 848 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 ABCD2Q9UBJ2 740 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 ARPP21Q9UBL0 812 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 SEC14L3Q9UDX4 400 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 DNAI1Q9UI46 699 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 TBL2Q9Y4P3 447 aaKnown RBP4.05□□□□□ -1.76
BRCA1-220ENST00000492859 ERICH3Q5RHP9 1530 aa4.05□□□□□ -1.76
BRCA1-220ENST00000492859 ABCC4O15439 1325 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 WDR33Q9C0J8 1336 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 A0A1B0GTH6 734 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PVALEFA0A1B0GWK0 134 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 A0A1W2PPM1 405 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 A0A1W2PR77 199 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CBY3A6NI87 242 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PRR19A6NJB7 356 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF785A8K8V0 405 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MAGEB17A8MXT2 336 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 NPIPA7E9PJI5 369 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 RAB27BO00194 218 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 FBP2O00757 339 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MAGEB2O15479 319 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 OGG1O15527 345 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 HSPA12AO43301 675 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ADAM23O75077 832 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MED6O75586 246 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ADAP1O75689 374 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 GLCEO94923 617 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ALX3O95076 343 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TOP3BO95985 862 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MT-ND1P03886 318 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 GUSBP08236 651 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 RD3LP0DJH9 198 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 NPIPA8P0DM63 369 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MYL6BP14649 208 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 LBPP18428 481 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MMP8P22894 467 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 WARSP23381 471 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MAOBP27338 520 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CHI3L1P36222 383 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ID1P41134 155 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ETV4P43268 484 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 LIMS1P48059 325 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 GSSP48637 474 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CDK9P50750 372 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CACNA2D1P54289 1103 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PKNOX1P55347 436 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MLF1P58340 268 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TXNL4AP83876 142 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CDC42EP1Q00587 391 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 RELAQ04206 551 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TLE1Q04724 770 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PRKCQQ04759 706 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MGAT3Q09327 533 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MGAT2Q10469 447 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms