RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TXLNB	Q8N3L3	684 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CSNK1A1L	Q8N752	337 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	LINC01555	Q8NAE3	123 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	OR8K1	Q8NGG5	319 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	OR5K2	Q8NHB8	316 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CALR3	Q96L12	384 aa	Known RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	HS6ST2	Q96MM7	605 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	IL17F	Q96PD4	163 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	TRIB1	Q96RU8	372 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	PKP2	Q99959	881 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CEP41	Q9BYV8	373 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	DRC3	Q9H069	523 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ISCU	Q9H1K1	167 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	EML4	Q9HC35	981 aa	Known RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	PCDH18	Q9HCL0	1135 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	SMOX	Q9NWM0	555 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ZFAT	Q9P243	1243 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CIDEB	Q9UHD4	219 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	ANAPC7	Q9UJX3	599 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	CAPN11	Q9UMQ6	739 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	WBP11	Q9Y2W2	641 aa	Known RBP	4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	PCDHGB1	Q9Y5G3	927 aa		4.96	□□□□□ -1.62
SEC13-219	ENST00000492602	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	LOC100289279	A0A1B0GTE1	492 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602		A8MVJ9	347 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602		A8MXE2	369 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	ESPN	B1AK53	854 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	C3orf80	F5H4A9	247 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	TGFBR3L	H3BV60	316 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	OVOL3	O00110	214 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	HS3ST1	O14792	307 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	PPP1R12A	O14974	1030 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SSX4	O60224	188 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	CDC123	O75794	336 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	STK10	O94804	968 aa	Known RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	PLAU	P00749	431 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	ATP1B2	P14415	290 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SRP14	P37108	136 aa	Known RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	XCR1	P46094	333 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SSR4	P51571	173 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC25A11	Q02978	314 aa	Known RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	FOXF2	Q12947	444 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	TFDP2	Q14188	446 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	PTPRCAP	Q14761	206 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	BRD3	Q15059	726 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	NOMO1	Q15155	1222 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SPA17	Q15506	151 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	DPYSL2	Q16555	572 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	AWAT1	Q58HT5	328 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	CCDC181	Q5TID7	509 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	NSUN5P2	Q63ZY6	315 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	KCTD11	Q693B1	232 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SHISA2	Q6UWI4	295 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	PLXDC2	Q6UX71	529 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SEZ6L2	Q6UXD5	910 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	IL20RB	Q6UXL0	311 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM47E	Q6ZV65	393 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	SH2D5	Q6ZV89	423 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	RNF44	Q7L0R7	432 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF550	Q7Z398	422 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	RHOT2	Q8IXI1	618 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	CYP4X1	Q8N118	509 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	BANP	Q8N9N5	519 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	OR9A4	Q8NGU2	314 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	OR51Q1	Q8NH59	317 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	TSLP	Q969D9	159 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	NTNG2	Q96CW9	530 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	MARK4	Q96L34	752 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	PPP1R2P1	Q96PQ5	205 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	ALS2CR12	Q96Q35	445 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	MIPEP	Q99797	713 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM173A	Q9BQD7	235 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	RAB11FIP5	Q9BXF6	653 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	VPS37B	Q9H9H4	285 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	HPF1	Q9NWY4	346 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	DDX56	Q9NY93	547 aa	Known RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	HCN3	Q9P1Z3	774 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	CRLS1	Q9UJA2	301 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	GDF2	Q9UK05	429 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	FBXW2	Q9UKT8	454 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	LIPT1	Q9Y234	373 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	PKP3	Q9Y446	797 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602	MED12	Q93074	2177 aa		4.95	□□□□□ -1.62
SEC13-219	ENST00000492602		A0A1B0GTH6	734 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	MBD3L3	A6NE82	208 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	CFAP99	D6REC4	459 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602		F8W8V4	182 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	APOL1	O14791	398 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	OR10H2	O60403	315 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	VPS26A	O75436	327 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SRP72	O76094	671 aa	Known RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	NDST3	O95803	873 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	CYP1A2	P05177	515 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SOD3	P08294	240 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	CNR1	P21554	472 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	CTNNA2	P26232	953 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	PSMB5	P28074	263 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	ACADL	P28330	430 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC1A1	P43005	524 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms