RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 KLHL18O94889 574 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 IL12RB1P42701 662 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 ALDH9A1P49189 494 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 MVDP53602 400 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 KCNJ10P78508 379 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 MVKQ03426 396 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 EMX1Q04741 257 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 RPS26P11Q5JNZ5 115 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-220ENST00000492280 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 AHSA2Q719I0 299 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 CBLL1Q75N03 491 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 TIFAQ96CG3 184 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 REEP1Q9H902 201 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
HMGN1-220ENST00000492280 MT-ND2P03891 347 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SEMG1P04279 462 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 EPHX1P07099 455 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 KRT20P35900 424 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 HPCAL1P37235 193 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF763Q0D2J5 394 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SLC5A12Q1EHB4 618 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 UAP1L1Q3KQV9 507 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF658BQ4V348 819 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-220ENST00000492280 RBM48Q5RL73 367 aaKnown RBP11.94□□□□□ -0.5
HMGN1-220ENST00000492280 KDM4DQ6B0I6 523 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SLC16A12Q6ZSM3 486 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 VN1R5Q7Z5H4 357 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 GALNT13Q8IUC8 556 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 OR9Q2Q8NGE9 314 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 RPL3LQ92901 407 aaKnown RBP11.94□□□□□ -0.5
HMGN1-220ENST00000492280 FAM129BQ96TA1 746 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 DOK1Q99704 481 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 ALOXE3Q9BYJ1 711 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 CHST8Q9H2A9 424 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 TM9SF3Q9HD45 589 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 MARK1Q9P0L2 795 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SH3GLB1Q9Y371 365 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 OR1A2Q9Y585 309 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SNX5Q9Y5X3 404 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 PRAMEF33A0A0G2JMD5 474 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 TBC1D3BA6NDS4 549 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SUV39H1O43463 412 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 PCDHGA12O60330 932 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 PFDN1O60925 122 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 PCMT1P22061 227 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 PSMB9P28065 219 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 GSTM2P28161 218 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 CD6P30203 668 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 CDH12P55289 794 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 GAB4Q2WGN9 574 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 IQCCQ4KMZ1 466 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 EIF3MQ7L2H7 374 aaKnown RBP11.94□□□□□ -0.5
HMGN1-220ENST00000492280 HEATR4Q86WZ0 1026 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 OR52E4Q8NGH9 312 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 OR9A1PQ8NGU1 263 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SLC5A11Q8WWX8 675 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 ZDHHC5Q9C0B5 715 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 SERGEFQ9UGK8 458 aa11.94□□□□□ -0.5
HMGN1-220ENST00000492280 UGDHO60701 494 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 BCAS1O75363 584 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 SERPIND1P05546 499 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 FPR1P21462 350 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 DDX6P26196 483 aaKnown RBP eCLIP11.93□□□□□ -0.51e-5■■■□□ 17.8
HMGN1-220ENST00000492280 DNAJA1P31689 397 aaKnown RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 VBP1P61758 197 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 KCNC3Q14003 757 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 NPTX1Q15818 432 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 HNRNPA1L2Q32P51 320 aaKnown RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 TNFAIP8L2Q6P589 184 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 SZRD1Q7Z422 152 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 C11orf96Q7Z7L8 435 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 FAM124AQ86V42 546 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 ETFBKMTQ8IXQ9 262 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 CACTIN-AS1Q8N1I8 211 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF540Q8NDQ6 660 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 DOCK8Q8NF50 2099 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 NDNFQ8TB73 568 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 C16orf78Q8WTQ4 265 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 FAR1Q8WVX9 515 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 FKBP10Q96AY3 582 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 TAMM41Q96BW9 452 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 C7orf34Q96L11 122 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 CCDC177Q9NQR7 707 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 DEC1Q9P2X7 70 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 DKK3Q9UBP4 350 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 PRKRAO75569 313 aaKnown RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 ADH1CP00326 375 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 PRNPP04156 253 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 LCKP06239 509 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 CHI3L1P36222 383 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 BMXP51813 675 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 PNLIPRP1P54315 467 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 CAMK2GQ13555 558 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 ATP1A4Q13733 1029 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 SPIN4Q56A73 249 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 NLRP8Q86W28 1048 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 GPR65Q8IYL9 337 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms