RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 FOLR3P41439 243 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 GCGRP47871 477 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 NAA20P61599 178 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.352e-8■■■■□ 25.9
DNMT3A-214ENST00000491288 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 TGM3Q08188 693 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ZNF844Q08AG5 666 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ASPHQ12797 758 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 KCNAB2Q13303 367 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ERV3-1Q14264 604 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 NCF4Q15080 339 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 RBBP7Q16576 425 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ZNF385CQ66K41 422 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 TTC19Q6DKK2 380 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 TMEM214Q6NUQ4 689 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 MILR1Q7Z6M3 343 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 TMEM151AQ8N4L1 468 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 KCT2Q8NC54 265 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ZCCHC10Q8TBK6 192 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 RDH11Q8TC12 318 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 NT5CQ8TCD5 201 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 SREK1Q8WXA9 508 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 FKBP10Q96AY3 582 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ZIM3Q96PE6 472 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 STMN4Q9H169 189 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 SPNS1Q9H2V7 528 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 SEMA4BQ9NPR2 832 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ZNF282Q9UDV7 671 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 TCFL5Q9UL49 500 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 PTRH2Q9Y3E5 179 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 ASB1Q9Y576 335 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 COL12A1Q99715 3063 aa12.84□□□□□ -0.35
DNMT3A-214ENST00000491288 A0A088AWK7 358 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 E2F3O00716 465 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 NKX2-8O15522 239 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 CLEC3AO75596 197 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 NSA2O95478 260 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 OTCP00480 354 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 SBK3P0C264 359 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 PRKAR1AP10644 381 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 ALOX12P18054 663 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 ZNF10P21506 573 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 CCR10P46092 362 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 PRKAA2P54646 552 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 HERVK_113P63132 956 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 TLE1Q04724 770 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 SSPNQ14714 243 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 TOR1AIP1Q5JTV8 583 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 CFAP157Q5JU67 520 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 BEND6Q5SZJ8 279 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 GRHL2Q6ISB3 625 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 CHSY3Q70JA7 882 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 ANKRD53Q8N9V6 530 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 OR9A4Q8NGU2 314 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 MIEF2Q96C03 454 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 MOCOSQ96EN8 888 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 APOPT1Q96IL0 206 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 VPS50Q96JG6 964 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 C10orf90Q96M02 699 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 CENPKQ9BS16 269 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 NTMT1Q9BV86 223 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 ERVK-6Q9BXR3 956 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 RHBGQ9H310 441 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 MKKSQ9NPJ1 570 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 COPG2Q9UBF2 871 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 TRPC4Q9UBN4 977 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 PCTPQ9UKL6 214 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 ZNF490Q9ULM2 529 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 STK38LQ9Y2H1 464 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 PLLPQ9Y342 182 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 MRPS18BQ9Y676 258 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 SEC16AO15027 2179 aa12.83□□□□□ -0.36
DNMT3A-214ENST00000491288 LRRK2Q5S007 2527 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CDC14CA4D256 554 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CTIFO43310 598 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 FOXS1O43638 330 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 PLIN3O60664 434 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 SPAG7O75391 227 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 IGHEP01854 428 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 PROCP04070 461 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CAPN1P07384 714 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 IL1RNP18510 177 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 EPORP19235 508 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CDH13P55290 713 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 RPS18P62269 152 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CLCQ05315 142 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 DSG2Q14126 1118 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CPSF6Q16630 551 aaKnown RBP eCLIP12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 ZNF678Q5SXM1 525 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 MRPL14Q6P1L8 145 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 FAM198BQ6UWH4 519 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 CLEC18BQ6UXF7 455 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 ZYG11AQ6WRX3 759 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 RAB43Q86YS6 212 aa12.82□□□□□ -0.36
DNMT3A-214ENST00000491288 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms