RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PCDHGB6Q9Y5F9 930 aa9.81□□□□□ -0.84
TTC28-207ENST00000490475 A0A0A6YYC8 382 aaPredicted RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 HMX2A2RU54 273 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 I3L1I5 382 aaPredicted RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 MASP2O00187 686 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 E2F3O00716 465 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 LRRTM2O43300 516 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 HNRNPRO43390 633 aaKnown RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 FOXS1O43638 330 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 KLHL18O94889 574 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 RASAL1O95294 804 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 WISP3O95389 354 aaPredicted RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 CLDN1O95832 211 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 GUCA1CO95843 209 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 SLC35G6P0C7Q6 338 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 CCDC166P0CW27 439 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 STMN1P16949 149 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 DCTP40126 519 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 CASP6P55212 293 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ILF2Q12905 390 aaKnown RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 NAB1Q13506 487 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 NAE1Q13564 534 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 BMPR2Q13873 1038 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 SLMAPQ14BN4 828 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ZRSR2Q15696 482 aaKnown RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 EXT1Q16394 746 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 HKDC1Q2TB90 917 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 PLAG1Q6DJT9 500 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 AGTRAPQ6RW13 159 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 SBSNQ6UWP8 590 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 CMC1Q7Z7K0 106 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 LAPTM4BQ86VI4 370 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 GSPT2Q8IYD1 628 aaKnown RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 HORMAD2Q8N7B1 307 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ATL1Q8WXF7 558 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ALKBH8Q96BT7 664 aaKnown RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 C8orf44Q96CB5 159 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 TSPAN17Q96FV3 270 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ZNF354BQ96LW1 612 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 MAGEB10Q96LZ2 347 aaPredicted RBP9.8□□□□□ -0.84
TTC28-207ENST00000490475 OR1F2PQ96R84 312 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ACSS3Q9H6R3 686 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 POPDC3Q9HBV1 291 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ANKHQ9HCJ1 492 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ARL15Q9NXU5 204 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 CTNNAL1Q9UBT7 734 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 ENTPD4Q9Y227 616 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 CSAG2Q9Y5P2 127 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 CPAMD8Q8IZJ3 1885 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 MYO7BQ6PIF6 2116 aa9.8□□□□□ -0.84
TTC28-207ENST00000490475 OR5H15A6NDH6 313 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 NPEPPSL1A6NEC2 478 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 POC1B-GALNT4F8VUJ3 575 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 H7BY64 318 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 HAT1O14929 419 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 MED26O95402 600 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 RNF224P0DH78 156 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 CD1DP15813 335 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 KCNC1P48547 511 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 AP1S2P56377 157 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 RAB10P61026 200 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 MEF2AQ02078 507 aaPredicted RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 EEF1A2Q05639 463 aaKnown RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 HERC3Q15034 1050 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 TSNQ15631 228 aaKnown RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 ZKSCAN8Q15776 578 aaPredicted RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 PPP1R3AQ16821 1122 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 BEND6Q5SZJ8 279 aaPredicted RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 MFSD4BQ5TF39 518 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 ZNF324BQ6AW86 544 aaPredicted RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 CAPN13Q6MZZ7 669 aaPredicted RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 LCTLQ6UWM7 567 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 RAPH1Q70E73 1250 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 CPEB2Q7Z5Q1 589 aaKnown RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 TICAM1Q8IUC6 712 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 ZC3H7AQ8IWR0 971 aaKnown RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 ARHGEF39Q8N4T4 335 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 SIRT6Q8N6T7 355 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 PSMF1Q92530 271 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 RELTQ969Z4 430 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 PYCR2Q96C36 320 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 UBXN10Q96LJ8 280 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 IMMP1LQ96LU5 166 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 PRAP1Q96NZ9 151 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 ANKZF1Q9H8Y5 726 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 CLK4Q9HAZ1 481 aaKnown RBP9.79□□□□□ -0.84
TTC28-207ENST00000490475 STMN3Q9NZ72 180 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 SLC22A7Q9Y694 548 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 CRYBG3Q68DQ2 2970 aa9.79□□□□□ -0.84
TTC28-207ENST00000490475 A0A087WUV0 522 aaPredicted RBP9.78□□□□□ -0.84
TTC28-207ENST00000490475 URADA6NGE7 173 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 PRAMEF2O60811 474 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 ENO2P09104 434 aaPredicted RBP9.78□□□□□ -0.84
TTC28-207ENST00000490475 SLC35E2BP0CK96 405 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 NPPBP16860 134 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 JAK1P23458 1154 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 CRABP2P29373 138 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 BCL6P41182 706 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 XCR1P46094 333 aa9.78□□□□□ -0.84
TTC28-207ENST00000490475 TAS2R50P59544 299 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms