RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ATP7BP35670 1465 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CD163L1Q9NR16 1453 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 SSH2Q76I76 1423 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 TONSLQ96HA7 1378 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CENPJQ9HC77 1338 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 A0A1B0GUL7 405 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 OR2AG2A6NM03 316 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 K7EQM0 130 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 MAP2K7O14733 419 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 TEX28O15482 410 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 FLRT2O43155 660 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 HSF2BPO75031 334 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 DNAJB6O75190 326 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 IDH1O75874 414 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 NEURL1O76050 574 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 DDNO94850 711 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 MBD3O95983 291 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CHRNGP07510 517 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 SMIM18P0DKX4 95 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 HSPA8P11142 646 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 DCTDP32321 178 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 NKX2-1P43699 371 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 RFX2P48378 723 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CD151P48509 253 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 AIF1P55008 147 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CDK3Q00526 305 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 SPIBQ01892 262 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 LTBQ06643 244 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ARHGEF6Q15052 776 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 XKR9Q5GH70 373 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CFAP157Q5JU67 520 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ENTPD8Q5MY95 495 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 SPOUT1Q5T280 376 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 VWA5B1Q5TIE3 1220 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 PARM1Q6UWI2 310 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ENPP7Q6UWV6 458 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 LINGO2Q7L985 606 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 EXOC3L1Q86VI1 746 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CDR2LQ86X02 465 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 PSTKQ8IV42 348 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 TDHQ8IZJ6 230 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 TTC5Q8N0Z6 440 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 BEST3Q8N1M1 668 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 C7orf57Q8NEG2 295 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 C17orf47Q8NEP4 570 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 NUDCD2Q8WVJ2 157 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 OSTF1Q92882 214 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CFAP36Q96G28 342 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CDKN2AIPNLQ96HQ2 116 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 URB1-AS1Q96HZ7 61 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF582Q96NG8 517 aaPredicted RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 OR6C1Q96RD1 312 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 SLC22A12Q96S37 553 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 RASL10BQ96S79 203 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF607Q96SK3 696 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 RAD9AQ99638 391 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 PIGQQ9BRB3 760 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 FNDC11Q9BVV2 318 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 CUEDC2Q9H467 287 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 EHD1Q9H4M9 534 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 SLA2Q9H6Q3 261 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 MAGEF1Q9HAY2 307 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 MMP25Q9NPA2 562 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 RDH8Q9NYR8 311 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ABT1Q9ULW3 272 aaKnown RBP2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 PADI3Q9ULW8 664 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ERVK-11Q9UQG0 969 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 FMN2Q9NZ56 1722 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 LAMC1P11047 1609 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 ADGRB2O60241 1585 aa2.99□□□□□ -1.93
DEPDC1-204ENST00000489862 EVPLQ92817 2033 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 EP400Q96L91 3159 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ROCK2O75116 1388 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PNPLA6Q8IY17 1366 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 DISP3Q9P2K9 1392 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 FAM230AA0A1W2PPH8 454 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 BECN2A8MW95 431 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 H0YIV9 168 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 LGALS8O00214 317 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 SSX4O60224 188 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 CLDN7O95471 211 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 CH25HO95992 272 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 CYP1A2P05177 515 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ACAA1P09110 424 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 CALCBP10092 127 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PCNAP12004 261 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 RPA2P15927 270 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 CKMT2P17540 419 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ATP6V1C1P21283 382 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PAICSP22234 425 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 TUBG1P23258 451 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 DGKAP23743 735 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PPP2R1AP30153 589 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 STIP1P31948 543 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 CA8P35219 290 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF75DP51815 510 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 MFAP3P55082 362 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 HUNKP57058 714 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PMPCAQ10713 525 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PNRC1Q12796 327 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms