RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 NME2P22392 152 aa8.79□□□□□ -1
SNX17-207ENST00000489402 TPP2P29144 1249 aaPredicted RBP8.79□□□□□ -1
SNX17-207ENST00000489402 CXCR5P32302 372 aa8.79□□□□□ -1
SNX17-207ENST00000489402 CYB561P49447 251 aa8.79□□□□□ -1
SNX17-207ENST00000489402 TIAL1Q01085 375 aaKnown RBP eCLIP8.79□□□□□ -1
SNX17-207ENST00000489402 MEF2AQ02078 507 aaPredicted RBP8.79□□□□□ -1
SNX17-207ENST00000489402 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
SNX17-207ENST00000489402 PWP1Q13610 501 aa8.79□□□□□ -1
SNX17-207ENST00000489402 DEFB134Q4QY38 66 aa8.79□□□□□ -1
SNX17-207ENST00000489402 HSP90AA5PQ58FG0 334 aa8.79□□□□□ -1
SNX17-207ENST00000489402 MBOAT1Q6ZNC8 495 aa8.79□□□□□ -1
SNX17-207ENST00000489402 ABHD13Q7L211 337 aa8.79□□□□□ -1
SNX17-207ENST00000489402 SIAH3Q8IW03 269 aa8.79□□□□□ -1
SNX17-207ENST00000489402 ZNF295-AS1Q8N0V1 137 aa8.79□□□□□ -1
SNX17-207ENST00000489402 CYP4X1Q8N118 509 aa8.79□□□□□ -1
SNX17-207ENST00000489402 POGLUT1Q8NBL1 392 aa8.79□□□□□ -1
SNX17-207ENST00000489402 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.79□□□□□ -1
SNX17-207ENST00000489402 ZNF740Q8NDX6 193 aa8.79□□□□□ -1
SNX17-207ENST00000489402 OR5T3Q8NGG3 340 aa8.79□□□□□ -1
SNX17-207ENST00000489402 AGAP11Q8TF27 550 aa8.79□□□□□ -1
SNX17-207ENST00000489402 CA5BP1Q8WTZ4 195 aa8.79□□□□□ -1
SNX17-207ENST00000489402 EEF1AKMT1Q8WVE0 214 aa8.79□□□□□ -1
SNX17-207ENST00000489402 MAGOHBQ96A72 148 aaKnown RBP8.79□□□□□ -1
SNX17-207ENST00000489402 C14orf79Q96F83 325 aa8.79□□□□□ -1
SNX17-207ENST00000489402 OLFM1Q99784 485 aa8.79□□□□□ -1
SNX17-207ENST00000489402 VKORC1Q9BQB6 163 aa8.79□□□□□ -1
SNX17-207ENST00000489402 SGPP1Q9BX95 441 aa8.79□□□□□ -1
SNX17-207ENST00000489402 TRIM54Q9BYV2 358 aa8.79□□□□□ -1
SNX17-207ENST00000489402 LANCL2Q9NS86 450 aa8.79□□□□□ -1
SNX17-207ENST00000489402 IARS2Q9NSE4 1012 aaKnown RBP8.79□□□□□ -1
SNX17-207ENST00000489402 COQ3Q9NZJ6 369 aa8.79□□□□□ -1
SNX17-207ENST00000489402 ADAMTS6Q9UKP5 1117 aa8.79□□□□□ -1
SNX17-207ENST00000489402 POLQO75417 2590 aa8.78□□□□□ -1
SNX17-207ENST00000489402 PKDREJQ9NTG1 2253 aa8.78□□□□□ -1
SNX17-207ENST00000489402 TRBC2A0A5B9 178 aa8.78□□□□□ -1
SNX17-207ENST00000489402 CTAGE15A4D2H0 777 aa8.78□□□□□ -1
SNX17-207ENST00000489402 URADA6NGE7 173 aa8.78□□□□□ -1
SNX17-207ENST00000489402 C19orf84I3L1E1 186 aa8.78□□□□□ -1
SNX17-207ENST00000489402 PSMD12O00232 456 aaPredicted RBP8.78□□□□□ -1
SNX17-207ENST00000489402 TFECO14948 347 aaPredicted RBP8.78□□□□□ -1
SNX17-207ENST00000489402 FANCGO15287 622 aa8.78□□□□□ -1
SNX17-207ENST00000489402 CHST10O43529 356 aa8.78□□□□□ -1
SNX17-207ENST00000489402 PRMT3O60678 531 aa8.78□□□□□ -1
SNX17-207ENST00000489402 GALR3O60755 368 aaPredicted RBP8.78□□□□□ -1
SNX17-207ENST00000489402 B4GALT2O60909 372 aa8.78□□□□□ -1
SNX17-207ENST00000489402 KRT38O76015 456 aa8.78□□□□□ -1
SNX17-207ENST00000489402 ZNF888P0CJ79 500 aaPredicted RBP8.78□□□□□ -1
SNX17-207ENST00000489402 NPPBP16860 134 aa8.78□□□□□ -1
SNX17-207ENST00000489402 MAGEA3P43357 314 aa8.78□□□□□ -1
SNX17-207ENST00000489402 OLR1P78380 273 aa8.78□□□□□ -1
SNX17-207ENST00000489402 HSF1Q00613 529 aa8.78□□□□□ -1
SNX17-207ENST00000489402 DUPD1Q68J44 220 aa8.78□□□□□ -1
SNX17-207ENST00000489402 TTC27Q6P3X3 843 aa8.78□□□□□ -1
SNX17-207ENST00000489402 C3P1Q6ZMU1 363 aa8.78□□□□□ -1
SNX17-207ENST00000489402 QSOX2Q6ZRP7 698 aa8.78□□□□□ -1
SNX17-207ENST00000489402 ZNF662Q6ZS27 426 aa8.78□□□□□ -1
SNX17-207ENST00000489402 CTAGE6Q86UF2 777 aa8.78□□□□□ -1
SNX17-207ENST00000489402 DOLPP1Q86YN1 238 aa8.78□□□□□ -1
SNX17-207ENST00000489402 KIF2BQ8N4N8 673 aa8.78□□□□□ -1
SNX17-207ENST00000489402 AFAP1L2Q8N4X5 818 aa8.78□□□□□ -1
SNX17-207ENST00000489402 CPSF7Q8N684 471 aaKnown RBP8.78□□□□□ -1
SNX17-207ENST00000489402 C2CD4AQ8NCU7 369 aaPredicted RBP8.78□□□□□ -1
SNX17-207ENST00000489402 ARMC2Q8NEN0 867 aa8.78□□□□□ -1
SNX17-207ENST00000489402 ABHD11Q8NFV4 315 aa8.78□□□□□ -1
SNX17-207ENST00000489402 ELP5Q8TE02 316 aa8.78□□□□□ -1
SNX17-207ENST00000489402 ATL1Q8WXF7 558 aa8.78□□□□□ -1
SNX17-207ENST00000489402 SDCCAG3Q96C92 435 aa8.78□□□□□ -1
SNX17-207ENST00000489402 LINGO1Q96FE5 620 aa8.78□□□□□ -1
SNX17-207ENST00000489402 PTCHD1Q96NR3 888 aa8.78□□□□□ -1
SNX17-207ENST00000489402 NDNQ99608 321 aa8.78□□□□□ -1
SNX17-207ENST00000489402 SPOCK3Q9BQ16 436 aa8.78□□□□□ -1
SNX17-207ENST00000489402 TRIM51Q9BSJ1 452 aa8.78□□□□□ -1
SNX17-207ENST00000489402 SARGQ9BW04 601 aa8.78□□□□□ -1
SNX17-207ENST00000489402 ARL15Q9NXU5 204 aa8.78□□□□□ -1
SNX17-207ENST00000489402 PPT2Q9UMR5 302 aa8.78□□□□□ -1
SNX17-207ENST00000489402 KLF13Q9Y2Y9 288 aaPredicted RBP8.78□□□□□ -1
SNX17-207ENST00000489402 CACNA1CQ13936 2221 aa8.78□□□□□ -1
SNX17-207ENST00000489402 ANKRD17O75179 2603 aaKnown RBP8.77□□□□□ -1.01
SNX17-207ENST00000489402 GTF3C1Q12789 2109 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 SAGE2PA6NJ88 616 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 KLRC4-KLRK1H3BQV0 150 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 RNH1P13489 461 aaKnown RBP8.77□□□□□ -1.01
SNX17-207ENST00000489402 PGAM1P18669 254 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 PTGS2P35354 604 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 KIR3DL1P43629 444 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 HLCSP50747 726 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 NR0B1P51843 470 aaKnown RBP8.77□□□□□ -1.01
SNX17-207ENST00000489402 ITGA8P53708 1063 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 AP1S2P56377 157 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 MLF1P58340 268 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 KRTAP10-9P60411 292 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 IL2P60568 153 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 TLE4Q04727 773 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 CSHL1Q14406 222 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 PHKG1Q16816 387 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 ZNF468Q5VIY5 522 aaPredicted RBP8.77□□□□□ -1.01
SNX17-207ENST00000489402 CCDC137Q6PK04 289 aaKnown RBP8.77□□□□□ -1.01
SNX17-207ENST00000489402 PAQR3Q6TCH7 311 aa8.77□□□□□ -1.01
SNX17-207ENST00000489402 MEX3BQ6ZN04 569 aaKnown RBP8.77□□□□□ -1.01
SNX17-207ENST00000489402 STRA8Q7Z7C7 330 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms