RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 SLC52A3Q9NQ40 469 aa4.47□□□□□ -1.69
CCL20-204ENST00000489160 INTS9Q9NV88 658 aaKnown RBP4.47□□□□□ -1.69
CCL20-204ENST00000489160 KCNN3Q9UGI6 736 aa4.47□□□□□ -1.69
CCL20-204ENST00000489160 GRID1Q9ULK0 1009 aa4.47□□□□□ -1.69
CCL20-204ENST00000489160 WDR37Q9Y2I8 494 aa4.47□□□□□ -1.69
CCL20-204ENST00000489160 C2CD2Q9Y426 696 aa4.47□□□□□ -1.69
CCL20-204ENST00000489160 FAM149AA5PLN7 773 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 FLRT2O43155 660 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 DIRAS3O95661 229 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 PLGP00747 810 aaPredicted RBP4.46□□□□□ -1.7
CCL20-204ENST00000489160 APOHP02749 345 aaPredicted RBP4.46□□□□□ -1.7
CCL20-204ENST00000489160 PRSS56P0CW18 603 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 ZNF18P17022 549 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 TDO2P48775 406 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 HNMTP50135 292 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 RASGEF1BQ0VAM2 473 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 TSTA3Q13630 321 aaPredicted RBP4.46□□□□□ -1.7
CCL20-204ENST00000489160 NONOQ15233 471 aaKnown RBP eCLIP4.46□□□□□ -1.7
CCL20-204ENST00000489160 LBHQ53QV2 105 aaPredicted RBP4.46□□□□□ -1.7
CCL20-204ENST00000489160 XKR3Q5GH77 459 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 C9orf50Q5SZB4 431 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 KCTD11Q693B1 232 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 MACC1Q6ZN28 852 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 TAF8Q7Z7C8 310 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 AMIGO1Q86WK6 493 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 AQP12AQ8IXF9 295 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 FBXW8Q8N3Y1 598 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 MARVELD2Q8N4S9 558 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 LEMD2Q8NC56 503 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 KBTBD8Q8NFY9 601 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 OR52E1Q8NGJ3 308 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 CKAP2Q8WWK9 683 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 HPSE2Q8WWQ2 592 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 CTNNBL1Q8WYA6 563 aaPredicted RBP4.46□□□□□ -1.7
CCL20-204ENST00000489160 P2RX5Q93086 422 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 PGM2Q96G03 612 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 SAMD8Q96LT4 415 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 PGLYRP2Q96PD5 576 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 CRACR2AQ9BSW2 395 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 IDI2Q9BXS1 227 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 ACTL8Q9H568 366 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 TRIM10Q9UDY6 481 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 UBQLN2Q9UHD9 624 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 SMC3Q9UQE7 1217 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 TNNQ9UQP3 1299 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 NUDCQ9Y266 331 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 CNTNAP2Q9UHC6 1331 aa4.46□□□□□ -1.7
CCL20-204ENST00000489160 DHX29Q7Z478 1369 aaKnown RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 KLF11O14901 512 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 GMFGO60234 142 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 SCGB2A1O75556 95 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 PALMO75781 387 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 OR6B1O95007 311 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 NADKO95544 446 aaPredicted RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 PTBP3O95758 552 aaKnown RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 EML2O95834 649 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 GAS8O95995 478 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 PDGFBP01127 241 aaPredicted RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 TPBGLP0DKB5 382 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 HSPA5P11021 654 aaKnown RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 PDHBP11177 359 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 CYP2A7P20853 494 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 PIK3R1P27986 724 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 MAGEA11P43364 429 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 ARFIP1P53367 373 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 MTTPP55157 894 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 SRP54P61011 504 aaKnown RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 CACNG1Q06432 222 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 TRAP1Q12931 704 aaKnown RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 SCGB2A2Q13296 93 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 PDE7AQ13946 482 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 TRADDQ15628 312 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 RBBP7Q16576 425 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 GTDC1Q4AE62 458 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 CEP55Q53EZ4 464 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 XKR6Q5GH73 641 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 ARHGEF16Q5VV41 709 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 LYSMD4Q5XG99 296 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 SLC25A24Q6NUK1 477 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 IRGCQ6NXR0 463 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 WDR88Q6ZMY6 472 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 IL17RELQ6ZVW7 336 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 G2E3Q7L622 706 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 ANKRD46Q86W74 232 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 TRIM58Q8NG06 486 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 RNASE8Q8TDE3 154 aaKnown RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 SLC26A7Q8TE54 656 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 SHC3Q92529 594 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 PYCR2Q96C36 320 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 CCDC3Q9BQI4 270 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 ATG101Q9BSB4 218 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 SHARPINQ9H0F6 387 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 COQ10BQ9H8M1 238 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 ZCCHC3Q9NUD5 404 aaKnown RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.45□□□□□ -1.72e-8■□□□□ 9.9
CCL20-204ENST00000489160 RABL2AQ9UBK7 228 aaPredicted RBP4.45□□□□□ -1.7
CCL20-204ENST00000489160 EXTL2Q9UBQ6 330 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 CTNNA3Q9UI47 895 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 MAN1B1Q9UKM7 699 aa4.45□□□□□ -1.7
CCL20-204ENST00000489160 SNX6Q9UNH7 406 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms