RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 PRMT9Q6P2P2 845 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 HACD2Q6Y1H2 254 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 FAM92BQ6ZTR7 304 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 IKBIPQ70UQ0 350 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 RNF44Q7L0R7 432 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 KANSL1Q7Z3B3 1105 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 VN1R4Q7Z5H5 301 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 PLXDC1Q8IUK5 500 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 PGAM4Q8N0Y7 254 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 TMEM132CQ8N3T6 1108 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 CAMKVQ8NCB2 501 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 OR2L5Q8NG80 312 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 NT5CQ8TCD5 201 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 NAT6Q93015 286 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 GFM2Q969S9 779 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 GAL3ST3Q96A11 431 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 CCDC74AQ96AQ1 378 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 C11orf24Q96F05 449 aaPredicted RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 TCTN2Q96GX1 697 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 PPM1MQ96MI6 270 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 FCRL4Q96PJ5 515 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 PRPF18Q99633 342 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 C17orf62Q9BQA9 187 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 THTPAQ9BU02 230 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 SORBS1Q9BX66 1292 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 CADM1Q9BY67 442 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 ARRDC1-AS1Q9H2J1 176 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 MMADHCQ9H3L0 296 aaPredicted RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 RMND5AQ9H871 391 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 MYNNQ9NPC7 610 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 C1GALT1Q9NS00 363 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 SOHLH2Q9NX45 425 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 EPHA6Q9UF33 1036 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 ADAM29Q9UKF5 820 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 CROTQ9UKG9 612 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 PRPF19Q9UMS4 504 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 TTC28Q96AY4 2481 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 A0A088AWK7 358 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 CPED1A4D0V7 1026 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 SLC9B1P1A6NJY1 282 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 RTCAO00442 366 aaKnown RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 SIGLEC6O43699 453 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 PCDHGA12O60330 932 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 GUCY1B2O75343 617 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 TBX6O95947 436 aaPredicted RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 EIF2S1P05198 315 aaKnown RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 PGRP06401 933 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 GIMD1P0DJR0 217 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ENGP17813 658 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ZNF10P21506 573 aaPredicted RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 BSGP35613 385 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 GSTM5P46439 218 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ZFP36L2P47974 494 aaKnown RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 ARFIP1P53367 373 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 GFERP55789 205 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 TAS2R50P59544 299 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 PSME3P61289 254 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 SRSF11Q05519 484 aaKnown RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 FOXM1Q08050 763 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 NR1D2Q14995 579 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 CCDC6Q16204 474 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 MAPKAPK3Q16644 382 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ADPRMQ3LIE5 342 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ZC3H12BQ5HYM0 836 aaKnown RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 C6orf10Q5SRN2 563 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 CPTPQ5TA50 214 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 C6orf163Q5TEZ5 329 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 NKAIN2Q5VXU1 208 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 LAIR1Q6GTX8 287 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 OR4C11Q6IEV9 310 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 MSANTD1Q6ZTZ1 278 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ABHD13Q7L211 337 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 R3HCC1LQ7Z5L2 792 aaKnown RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 SPRED1Q7Z699 444 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 DHDDSQ86SQ9 333 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 RETREG3Q86VR2 466 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 RIMKLAQ8IXN7 391 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ULK2Q8IYT8 1036 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 CARFQ8N187 725 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 MINDY1Q8N5J2 469 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 EID2Q8N6I1 236 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 CSNK1A1LQ8N752 337 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 FAM181AQ8N9Y4 354 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 OR2I1PQ8NGU4 316 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ZCCHC10Q8TBK6 192 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 C16orf78Q8WTQ4 265 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 N4BP2L2Q92802 583 aaPredicted RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 PPCDCQ96CD2 204 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 MS4A6EQ96DS6 147 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 EGLN2Q96KS0 407 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 TRAPPC9Q96Q05 1148 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 OR2A5Q96R48 311 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 OR52E6Q96RD3 313 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 MAP3K3Q99759 626 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 MACROD1Q9BQ69 325 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 TBCDQ9BTW9 1192 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 SLC6A16Q9GZN6 736 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ROGDIQ9GZN7 287 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 RAB33BQ9H082 229 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms