RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 CASP10Q92851 521 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 FER1L6-AS2Q96M78 137 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 C1orf147Q96MC9 270 aaPredicted RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 OR10A4Q9H209 315 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 ADNPQ9H2P0 1102 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 ZCCHC17Q9NP64 241 aaKnown RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 RAB9BQ9NP90 201 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 IL1RAPQ9NPH3 570 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 IARS2Q9NSE4 1012 aaKnown RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 CHCHD3Q9NX63 227 aaKnown RBP2.88□□□□□ -1.95
RFC4-213ENST00000489028 GPR83Q9NYM4 423 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 GON4LQ3T8J9 2241 aa2.88□□□□□ -1.95
RFC4-213ENST00000489028 hCG_38984A0A1B0GV85 526 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 PRSS46E5RG02 174 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 RNF103O00237 685 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 PHF1O43189 567 aaPredicted RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 MLNRO43193 412 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 RPLP0P05388 317 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 CCDC175P0C221 793 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 PCP11498 1178 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 AZU1P20160 251 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 GPR183P32249 361 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 ZFP36L2P47974 494 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 NDUFV3P56181 108 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 SULT2A1Q06520 285 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 FAM174BQ3ZCQ3 159 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 EIPR1Q53HC9 387 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 FGD3Q5JSP0 725 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 C1orf141Q5JVX7 400 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 C6orf136Q5SQH8 315 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 SEL1L3Q68CR1 1132 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 CHST3Q7LGC8 479 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 ZC3H3Q8IXZ2 948 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 DND1Q8IYX4 353 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 CCAR2Q8N163 923 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 OR9Q2Q8NGE9 314 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 OCC1Q8TAD7 63 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 TOMM40LQ969M1 308 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 C11orf52Q96A22 123 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 EDEM3Q9BZQ6 932 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 ZWILCHQ9H900 591 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 GTSE1Q9NYZ3 720 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 POLKQ9UBT6 870 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 PLCL2Q9UPR0 1127 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 MRPS18CQ9Y3D5 142 aaKnown RBP2.87□□□□□ -1.95
RFC4-213ENST00000489028 KLK4Q9Y5K2 254 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 COLEC10Q9Y6Z7 277 aa2.87□□□□□ -1.95
RFC4-213ENST00000489028 CROCCQ5TZA2 2017 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 ARHGEF33A8MVX0 844 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 E5RGE8 158 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 FAM86B1E9PN63 330 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 TRAFD1O14545 582 aaPredicted RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 ZNF749O43361 778 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 KIF5CO60282 957 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 GALR3O60755 368 aaPredicted RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 PRDM1O75626 825 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 HSPA4LO95757 839 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 MELTFP08582 738 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 QDPRP09417 244 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 FAM86B2P0C5J1 330 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 KRTAP1-4P0C5Y4 121 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 VDRP11473 427 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 LBPP18428 481 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 PSMB4P28070 264 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 CRKLP46109 303 aaKnown RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 KHKP50053 298 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 PTENP60484 403 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 ABCE1P61221 599 aaKnown RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 TNK1Q13470 666 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 PEX6Q13608 980 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 UPP1Q16831 310 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 C15orf32Q32M92 178 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 HIGD2BQ4VC39 106 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 LRRC73Q5JTD7 316 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 HECTD3Q5T447 861 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 FUT10Q6P4F1 479 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 CEACAM19Q7Z692 300 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 PRUNE1Q86TP1 453 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 RNF130Q86XS8 419 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 OR4N5Q8IXE1 308 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 SPPL2AQ8TCT8 520 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 RAD54LQ92698 747 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 ST6GALNAC6Q969X2 333 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 ATP6V1E2Q96A05 226 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 LURAP1Q96LR2 239 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 ATF6BQ99941 703 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 ADPGKQ9BRR6 497 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 ALKBH7Q9BT30 221 aaPredicted RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 RSPH9Q9H1X1 276 aaPredicted RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 ALDH8A1Q9H2A2 487 aaPredicted RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 C5orf66Q9H5L9 145 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 FNDC4Q9H6D8 234 aaPredicted RBP2.86□□□□□ -1.95
RFC4-213ENST00000489028 JPT2Q9H910 190 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 NSG2Q9Y328 171 aa2.86□□□□□ -1.95
RFC4-213ENST00000489028 FER1L5A0AVI2 2057 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 K7EQG2 157 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 PHOX2AO14813 284 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 SIGLEC5O15389 551 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 LUC7L3O95232 432 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms