RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CLK4Q9HAZ1 481 aaKnown RBP12.22□□□□□ -0.45
PHF1-210ENST00000488767 ATP13A2Q9NQ11 1180 aa12.22□□□□□ -0.45
PHF1-210ENST00000488767 HCN3Q9P1Z3 774 aa12.22□□□□□ -0.45
PHF1-210ENST00000488767 COPG2Q9UBF2 871 aa12.22□□□□□ -0.45
PHF1-210ENST00000488767 C19orf25Q9UFG5 118 aaPredicted RBP12.22□□□□□ -0.45
PHF1-210ENST00000488767 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
PHF1-210ENST00000488767 MKL2Q9ULH7 1088 aa12.22□□□□□ -0.45
PHF1-210ENST00000488767 ATMQ13315 3056 aa12.22□□□□□ -0.45
PHF1-210ENST00000488767 CACNA1GO43497 2377 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 SMIM23A6NLE4 172 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 GALR3O60755 368 aaPredicted RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 CNOT3O75175 753 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 CDH16O75309 829 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 RDH16O75452 317 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 CLEC3AO75596 197 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 UQCRHP07919 91 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 GSTA1P08263 222 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 ZNF888P0CJ79 500 aaPredicted RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 MTHFD2P13995 350 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 EEF1DP29692 281 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 DEKP35659 375 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 CASP2P42575 452 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 XCR1P46094 333 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 AGTR2P50052 363 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 RAB8AP61006 207 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 AP2B1P63010 937 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 NFATC3Q12968 1075 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 CHAF1BQ13112 559 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 AIMP2Q13155 320 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 GTF2H2Q13888 395 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 E2F2Q14209 437 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 RCN2Q14257 317 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 PCBP2Q15366 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
PHF1-210ENST00000488767 DCAF10Q5QP82 559 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 CPZQ66K79 652 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 TCTN3Q6NUS6 607 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 GTF2H2CQ6P1K8 395 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 TRIM40Q6P9F5 258 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 PLD6Q8N2A8 252 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 MREGQ8N565 214 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 SRFBP1Q8NEF9 429 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 GAL3ST3Q96A11 431 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 PHF21BQ96EK2 531 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 MAGEB10Q96LZ2 347 aaPredicted RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 OR1F2PQ96R84 312 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 SLC6A16Q9GZN6 736 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 ROGDIQ9GZN7 287 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 GPR83Q9NYM4 423 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 DCDC2Q9UHG0 476 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 FBXL4Q9UKA2 621 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 MRPS2Q9Y399 296 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 PCDHGA9Q9Y5G4 932 aaKnown RBP12.21□□□□□ -0.45
PHF1-210ENST00000488767 PCDHGA11Q9Y5H2 935 aa12.21□□□□□ -0.45
PHF1-210ENST00000488767 KALRNO60229 2985 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 A6NL46 340 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 STX16-NPEPL1H3BU86 382 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 STX16O14662 325 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 FFAR3O14843 346 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 GPR42O15529 346 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 UGDHO60701 494 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 BMP10O95393 424 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 C8orf89P0DMQ9 161 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 PCNAP12004 261 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 ITGA3P26006 1051 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 HSD17B3P37058 310 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 SLCO1A2P46721 670 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 CCT5P48643 541 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 MAT1AQ00266 395 aaKnown RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 SYT16Q17RD7 645 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 ERCC6LQ2NKX8 1250 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 LIPJQ5W064 366 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 GRHL2Q6ISB3 625 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 ASB18Q6ZVZ8 466 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 CHSY3Q70JA7 882 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 PRSS41Q7RTY9 318 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 HPS6Q86YV9 775 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 ZC3H7AQ8IWR0 971 aaKnown RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 RIBC1Q8N443 379 aaPredicted RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 AFAP1L2Q8N4X5 818 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 UTP15Q8TED0 518 aaKnown RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 PPP4R1Q8TF05 950 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 TM9SF4Q92544 642 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 MOCOSQ96EN8 888 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 REXO4Q9GZR2 422 aaKnown RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 RHBGQ9H310 441 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 IPPKQ9H8X2 491 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 ZNF71Q9NQZ8 489 aaPredicted RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 ZNF358Q9NW07 568 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.2□□□□□ -0.46
PHF1-210ENST00000488767 ZNF451Q9Y4E5 1061 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 PCDHGB7Q9Y5F8 929 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 HS3ST3B1Q9Y662 390 aa12.2□□□□□ -0.46
PHF1-210ENST00000488767 V9GYY5 206 aaPredicted RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 MDC1Q14676 2089 aaKnown RBP12.2□□□□□ -0.46
PHF1-210ENST00000488767 NSG1A0A0A6YYJ2 146 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 ZNF860A6NHJ4 632 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 GOLGA8RI6L899 631 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 ERI3O43414 337 aaKnown RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 B3GALT2O43825 422 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 GLRA3O75311 464 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms