RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RUNDC3AQ59EK9 446 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 LCN8Q6JVE9 175 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 DNAJC14Q6Y2X3 702 aaPredicted RBP9.02□□□□□ -0.97
SF3B1-211ENST00000487698 RNF111Q6ZNA4 994 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 TMEM26Q6ZUK4 368 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 ANKRD46Q86W74 232 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 MFSD9Q8NBP5 474 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 FAM46DQ8NEK8 389 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 NELL1Q92832 810 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 MIEF2Q96C03 454 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 MTERF3Q96E29 417 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 CPPED1Q9BRF8 314 aaPredicted RBP9.02□□□□□ -0.97
SF3B1-211ENST00000487698 DUSP26Q9BV47 211 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 MUC13Q9H3R2 512 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 REEP4Q9H6H4 257 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 PRM3Q9NNZ6 103 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 ACTR10Q9NZ32 417 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 STOML1Q9UBI4 398 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 ADAM29Q9UKF5 820 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 KLHL20Q9Y2M5 609 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 PCDHB14Q9Y5E9 798 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 ENTPD2Q9Y5L3 495 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 BDP1A6H8Y1 2624 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 ZDBF2Q9HCK1 2354 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 PI4KAP42356 2102 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 USP34Q70CQ2 3546 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TCRBV3S1A0A5B6 114 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 B4DGG1 531 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 FKBP9O95302 570 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 FURINP09958 794 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 HTR1EP28566 365 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 PTDSS1P48651 473 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TRPC1P48995 793 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ARFIP1P53367 373 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ATXN3P54252 364 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 HHEXQ03014 270 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 CYP4F3Q08477 520 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 DUOXA1Q1HG43 343 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TMEM35AQ53FP2 167 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 CPTPQ5TA50 214 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ANKRD26P1Q6NSI1 321 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 PAGE2Q7Z2X7 111 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 NUDT13Q86X67 352 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 DHFR2Q86XF0 187 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TMEM132CQ8N3T6 1108 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TBC1D19Q8N5T2 526 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 NRG4Q8WWG1 115 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ZUFSPQ96AP4 578 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 RGMAQ96B86 450 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 DUS3LQ96G46 650 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 CCDC115Q96NT0 180 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 KCTD14Q9BQ13 255 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 DDX31Q9H8H2 851 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ACTR3BQ9P1U1 418 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ANKMY1Q9P2S6 941 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 BTNL2Q9UIR0 455 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ANGPTL2Q9UKU9 493 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ERVK-11Q9UQG0 969 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 WBP11Q9Y2W2 641 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 PCDHGA2Q9Y5H1 932 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 PRSS51A0A1B0GVH4 220 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 C2orf74A8MZ97 194 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 C4orf51C9J302 202 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 RTCAO00442 366 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 RFXANKO14593 260 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ARPC2O15144 300 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 CAPN5O15484 640 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 IL3P08700 152 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 POLR2CP19387 275 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 MAGP20916 626 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 RPL3P39023 403 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 GSTM5P46439 218 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 FASLGP48023 281 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TAS2R50P59544 299 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 RPS15AP62244 130 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 RHDQ02161 417 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 SLC5A12Q1EHB4 618 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF385BQ569K4 471 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 WDR45BQ5MNZ6 344 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 CCNYL2Q5T2Q4 361 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 FCRL6Q6DN72 434 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ZFP1Q6P2D0 407 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TSSK4Q6SA08 328 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 SPESP1Q6UW49 350 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 GPR155Q7Z3F1 870 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 VN1R4Q7Z5H5 301 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 C17orf82Q86X59 251 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 GKN2Q86XP6 184 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF548Q8NEK5 533 aaPredicted RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TRPV3Q8NET8 790 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 OR10G6Q8NH81 332 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 MS4A6EQ96DS6 147 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF583Q96ND8 569 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 QRFPRQ96P65 431 aa9.01□□□□□ -0.97
SF3B1-211ENST00000487698 TEFMQ96QE5 360 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 PRPF18Q99633 342 aaKnown RBP9.01□□□□□ -0.97
SF3B1-211ENST00000487698 CENPKQ9BS16 269 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms