RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 LMBRD1Q9NUN5 540 aa7.14□□□□□ -1.27
PDPN-205ENST00000487038 HPF1Q9NWY4 346 aa7.14□□□□□ -1.27
PDPN-205ENST00000487038 MTRF1LQ9UGC7 380 aaKnown RBP7.14□□□□□ -1.27
PDPN-205ENST00000487038 TSR3Q9UJK0 312 aaKnown RBP7.14□□□□□ -1.27
PDPN-205ENST00000487038 ACAD8Q9UKU7 415 aa7.14□□□□□ -1.27
PDPN-205ENST00000487038 INTUQ9ULD6 942 aa7.14□□□□□ -1.27
PDPN-205ENST00000487038 EFR3BQ9Y2G0 817 aa7.14□□□□□ -1.27
PDPN-205ENST00000487038 NAALAD2Q9Y3Q0 740 aa7.14□□□□□ -1.27
PDPN-205ENST00000487038 FAM215AQ9Y5M1 114 aa7.14□□□□□ -1.27
PDPN-205ENST00000487038 KCNE1BA0A087WTH5 132 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 TRBV11-1A0A0K0K1C0 115 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 GOLGA6L9A6NEM1 432 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 OR2W5A6NFC9 320 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 ERI2A8K979 691 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 FAM166BA8MTA8 275 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 INAFM1C9JVW0 142 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 GOLGA6L22H0YM25 854 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 H3BMM5 538 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 SYT5O00445 386 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 CD3EAPO15446 510 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 PSIP1O75475 530 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 NDUFS3O75489 264 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 TJP3O95049 919 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 SYF2O95926 243 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 IGHG3P01860 377 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 TPM1P09493 284 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 EPXP11678 715 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 BMP7P18075 431 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 RPS3P23396 243 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDPN-205ENST00000487038 ADRA1DP25100 572 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 MAN2A2P49641 1150 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 HADHBP55084 474 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 EIF3BP55884 814 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 ACVR1Q04771 509 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 TRIM14Q14142 442 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 SEMA3AQ14563 771 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 TCEAL1Q15170 157 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 ASTE1Q2TB18 679 aaPredicted RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 CATSPEREQ5SY80 951 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 RNF187Q5TA31 235 aaPredicted RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 PPP1R21Q6ZMI0 780 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 QSOX2Q6ZRP7 698 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 CAPN12Q6ZSI9 719 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 KIAA0408Q6ZU52 694 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 ZNF534Q76KX8 674 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 MDGA2Q7Z553 956 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 ASPGQ86U10 573 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 KRTAP1-3Q8IUG1 177 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 LIX1LQ8IVB5 337 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 LRRC75A-AS1Q8N1F1 130 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 OTUD6BQ8N6M0 293 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 PPFIBP2Q8ND30 876 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 PPHLN1Q8NEY8 458 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 OR2M7Q8NG81 312 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 OR52K1Q8NGK4 314 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 PTCHD1Q96NR3 888 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 SH3GL2Q99962 352 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 TTTY12Q9BZ98 90 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 OSBPL8Q9BZF1 889 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 P2RY12Q9H244 342 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 EXO5Q9H790 373 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 LANCL2Q9NS86 450 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 TMEM184CQ9NVA4 438 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 KCMF1Q9P0J7 381 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 SAMD15Q9P1V8 674 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 FBXW2Q9UKT8 454 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 R3HDM2Q9Y2K5 976 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 YARS2Q9Y2Z4 477 aaKnown RBP7.13□□□□□ -1.27
PDPN-205ENST00000487038 SLC22A7Q9Y694 548 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 ARID1AO14497 2285 aa7.13□□□□□ -1.27
PDPN-205ENST00000487038 NCKAP5O14513 1909 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 A0A1B0GVC2 190 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 FEZF1A0PJY2 475 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 ZNF860A6NHJ4 632 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 CLCA1A8K7I4 914 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 E5RI56 91 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 E7EVH7 732 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 H7BY64 318 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 H7C1Q1 480 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 PSMD12O00232 456 aaPredicted RBP7.12□□□□□ -1.27
PDPN-205ENST00000487038 SMAD7O15105 426 aaKnown RBP7.12□□□□□ -1.27
PDPN-205ENST00000487038 SUSD5O60279 629 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 SMPD2O60906 423 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 METTL18O95568 372 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 SLC16A8O95907 504 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 MBD3O95983 291 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 STATHP02808 62 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 CD53P19397 219 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 BMP5P22003 454 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 PTPN7P35236 360 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 ADH7P40394 386 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 MARCKSL1P49006 195 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 SORDQ00796 357 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 TERF2Q15554 542 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 TTLL9Q3SXZ7 439 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 FBXL19-AS1Q494R0 122 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 RTL6Q6ICC9 239 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 C11orf63Q6NUN7 778 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms