RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 VAC14Q08AM6 782 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 MYBPC3Q14896 1274 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 LRRC23Q53EV4 343 aaPredicted RBP19.5■□□□□ 0.71
HPS3-206ENST00000486530 USP30Q70CQ3 517 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 STK32CQ86UX6 486 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 CLEC4FQ8N1N0 589 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 SYNPOQ8N3V7 929 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 OR4K1Q8NGD4 311 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 PNPT1Q8TCS8 783 aaKnown RBP19.5■□□□□ 0.71
HPS3-206ENST00000486530 RDH12Q96NR8 316 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 MS4A8Q9BY19 250 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 CHST8Q9H2A9 424 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 UTS2RQ9UKP6 389 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 PIAS3Q9Y6X2 628 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 HEATR5BQ9P2D3 2071 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 H0YAE9 185 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 KLHL18O94889 574 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 SNAP29O95721 258 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 ALPLP05186 524 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 ATP6V1B1P15313 513 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 DRD1P21728 446 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 PSMB5P28074 263 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 MAT2AP31153 395 aaKnown RBP19.5■□□□□ 0.71
HPS3-206ENST00000486530 RAB28P51157 221 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 IER5LQ5T953 404 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 KHDRBS2Q5VWX1 349 aaKnown RBP19.5■□□□□ 0.71
HPS3-206ENST00000486530 LINC01555Q8NAE3 123 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 TSPAN14Q8NG11 270 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 SIPA1Q96FS4 1042 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 SCARF2Q96GP6 870 aaPredicted RBP19.5■□□□□ 0.71
HPS3-206ENST00000486530 CAMK1GQ96NX5 476 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 NRTNQ99748 197 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 C8orf33Q9H7E9 229 aaPredicted RBP19.5■□□□□ 0.71
HPS3-206ENST00000486530 CAAP1Q9H8G2 361 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 FZD3Q9NPG1 666 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 IMP3Q9NV31 184 aaKnown RBP19.5■□□□□ 0.71
HPS3-206ENST00000486530 NCKAP1Q9Y2A7 1128 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 AP1M2Q9Y6Q5 423 aa19.5■□□□□ 0.71
HPS3-206ENST00000486530 TRIOBPQ9H2D6 2365 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 GPR37L1O60883 481 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 ALBP02768 609 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 KDELR2P33947 212 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 ADARB1P78563 741 aaKnown RBP19.49■□□□□ 0.71
HPS3-206ENST00000486530 GRSF1Q12849 480 aaKnown RBP eCLIP19.49■□□□□ 0.71
HPS3-206ENST00000486530 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.49■□□□□ 0.71
HPS3-206ENST00000486530 KCTD21Q4G0X4 260 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 DEPDC1Q5TB30 811 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 SATL1Q86VE3 508 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 TRIML2Q8N7C3 387 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 ANKRD53Q8N9V6 530 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 MVB12BQ9H7P6 319 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 CLK4Q9HAZ1 481 aaKnown RBP19.49■□□□□ 0.71
HPS3-206ENST00000486530 SPASTQ9UBP0 616 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 MOSPD1Q9UJG1 213 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 GPSM3Q9Y4H4 160 aa19.49■□□□□ 0.71
HPS3-206ENST00000486530 F5P12259 2224 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 PLPP1O14494 284 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 LATO43561 262 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 ZNF682O95780 498 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 NELFEP18615 380 aaKnown RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 TPP2P29144 1249 aaPredicted RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 PKLRP30613 574 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 NR1H2P55055 460 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 PPP2CBP62714 309 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 PPP2CAP67775 309 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 MRPS21P82921 87 aaKnown RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 MC1RQ01726 317 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 SFSWAPQ12872 951 aaKnown RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 BIRC2Q13490 618 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 RGNQ15493 299 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 PAGE2Q7Z2X7 111 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 PATL1Q86TB9 770 aaKnown RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 OR5K1Q8NHB7 308 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 FBXL20Q96IG2 436 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 DPH2Q9BQC3 489 aaPredicted RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 USE1Q9NZ43 259 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 WBP11Q9Y2W2 641 aaKnown RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 EME2A4GXA9 379 aaPredicted RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 H7BY64 318 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 SLC31A1O15431 190 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 MBTPS2O43462 519 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 TBX6O95947 436 aaPredicted RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 IL3P08700 152 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 HOXC4P09017 264 aaPredicted RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 THRBP10828 461 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 KIAA1024LP59773 190 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 HBA1P69905 142 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 EPS8Q12929 822 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 UAP1L1Q3KQV9 507 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 CCNYL2Q5T2Q4 361 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 TTC33Q6PID6 262 aaPredicted RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 USP51Q70EK9 711 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 ZDHHC21Q8IVQ6 265 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 OR2L8Q8NGY9 312 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 PRAP1Q96NZ9 151 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 TSC22D3Q99576 134 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 RBM4BQ9BQ04 359 aaKnown RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 RBM4Q9BWF3 364 aaKnown RBP19.48■□□□□ 0.71
HPS3-206ENST00000486530 PLEKHM1Q9Y4G2 1056 aa19.48■□□□□ 0.71
HPS3-206ENST00000486530 PDZK1P1A8MUH7 402 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms