RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 FGF21Q9NSA1 209 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 GEMIN8Q9NWZ8 242 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 GPRC5BQ9NZH0 403 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 NDOR1Q9UHB4 597 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 RARRES3Q9UL19 164 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 PLCL2Q9UPR0 1127 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 TIMM22Q9Y584 194 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 AK5Q9Y6K8 562 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CHD8Q9HCK8 2581 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CEP295Q9C0D2 2601 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 LAMA5O15230 3695 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 A0A0G2JN53 185 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TRBC2A0A5B9 178 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 OR2A25A4D2G3 310 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SAP18O00422 153 aaKnown RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 UBFD1O14562 309 aaKnown RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 HGSO14964 777 aaPredicted RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 POLR1CO15160 346 aaPredicted RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 BIRC5O15392 142 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 P2RX6O15547 441 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 NDUFS4O43181 175 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 NPHS1O60500 1241 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SKAP2O75563 359 aaPredicted RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 OR2B3O76000 313 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TNFSF15O95150 251 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 FKBP9O95302 570 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 MLYCDO95822 493 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 OTCP00480 354 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 NTRK1P04629 796 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SERPINE1P05121 402 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CAPN1P07384 714 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 DHRS4L1P0CG22 281 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CD22P20273 847 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 HRH2P25021 359 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CXCR2P25025 360 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CCKBRP32239 447 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SLC1A6P48664 564 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 HTR6P50406 440 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 GYS2P54840 703 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 FOXA1P55317 472 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 ITGA1P56199 1179 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 RPS15AP62244 130 aaKnown RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 GABREP78334 506 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 BTKQ06187 659 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 BST1Q10588 318 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 LCP2Q13094 533 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 IFT88Q13099 833 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TRAF3Q13114 568 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 LAPTM5Q13571 262 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 RCN2Q14257 317 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 ZRSR2Q15696 482 aaKnown RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 KIF26BQ2KJY2 2108 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 HKDC1Q2TB90 917 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 ARL13AQ5H913 290 aaPredicted RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 TOR1AIP1Q5JTV8 583 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SH2D4BQ5SQS7 431 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 WASHC2DQ5SRD0 308 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 C1orf189Q5VU69 101 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 LIPJQ5W064 366 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CES4AQ5XG92 561 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 ATG16L1Q676U5 607 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CLEC6AQ6EIG7 209 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 GRHL2Q6ISB3 625 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 ZNF425Q6IV72 752 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 LETMD1Q6P1Q0 360 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TMIGD1Q6UXZ0 262 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 FRMD7Q6ZUT3 714 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 FAM47EQ6ZV65 393 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TMPRSS7Q7RTY8 843 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 ASPGQ86U10 573 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CUZD1Q86UP6 607 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 PPP1R3BQ86XI6 285 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 KMT5CQ86Y97 462 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TMEM126BQ8IUX1 230 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TRIM42Q8IWZ5 723 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 DDIASQ8IXT1 998 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.37□□□□□ -1.55
COPS3-208ENST00000486032 GPR135Q8IZ08 494 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 D2HGDHQ8N465 521 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 METTL27Q8N6F8 245 aaPredicted RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 CSNK1A1LQ8N752 337 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 TTC29Q8NA56 475 aaPredicted RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 MFSD9Q8NBP5 474 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 OR1L3Q8NH93 324 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 WDR36Q8NI36 951 aaKnown RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 METTL6Q8TCB7 284 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 LRRC8CQ8TDW0 803 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 AGAP11Q8TF27 550 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SLC13A3Q8WWT9 602 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SELENOMQ8WWX9 145 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 USP7Q93009 1102 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 PMEPA1Q969W9 287 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 GRAMD1AQ96CP6 724 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 CLIP3Q96DZ5 547 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 THOC1Q96FV9 657 aaKnown RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 CNDP1Q96KN2 507 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 MTERF1Q99551 399 aaKnown RBP5.37□□□□□ -1.55
COPS3-208ENST00000486032 EFCAB11Q9BUY7 163 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 SCNM1Q9BWG6 230 aa5.37□□□□□ -1.55
COPS3-208ENST00000486032 YIPF2Q9BWQ6 316 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms