RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 GPR18Q14330 331 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 AASDHQ4L235 1098 aaPredicted RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 TMEM35AQ53FP2 167 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ANXA8L1Q5VT79 327 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 CYP2R1Q6VVX0 501 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 PAGE2Q7Z2X7 111 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TAF8Q7Z7C8 310 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ANKRD46Q86W74 232 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 IFNEQ86WN2 208 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TMEM132CQ8N3T6 1108 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 DEFB119Q8N690 84 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 MFSD9Q8NBP5 474 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 RGMAQ96B86 450 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 LRGUKQ96M69 825 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 QRFPRQ96P65 431 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 OR2A14Q96R47 310 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ECSITQ9BQ95 431 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TRIM15Q9C019 465 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 KAT8Q9H7Z6 458 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 DDX31Q9H8H2 851 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 CCM2LQ9NUG4 571 aaPredicted RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 EGFL7Q9UHF1 273 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 USP22Q9UPT9 525 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 INVSQ9Y283 1065 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 KLK4Q9Y5K2 254 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TCRBV5S2A0A599 114 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TLR4O00206 839 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 RNASET2O00584 256 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 HAT1O14929 419 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 CAPN5O15484 640 aaPredicted RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 NDUFS4O43181 175 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 FKBP9O95302 570 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 NME1P15531 152 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 JUNDP17535 347 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 GRIA3P42263 894 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TAS2R50P59544 299 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 CYP4F2P78329 520 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ZNF385BQ569K4 471 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 GPR155Q7Z3F1 870 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ADCK2Q7Z695 626 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 PLD3Q8IV08 490 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TBC1D19Q8N5T2 526 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TRPV3Q8NET8 790 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 GOT1L1Q8NHS2 421 aaPredicted RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 SLC37A2Q8TED4 501 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 PATE1Q8WXA2 126 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 DNASE2BQ8WZ79 361 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TM4SF18Q96CE8 201 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 RSRC1Q96IZ7 334 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 TACO1Q9BSH4 297 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 THUMPD3Q9BV44 507 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 LRRC61Q9BV99 259 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 SORBS1Q9BX66 1292 aaKnown RBP13.42□□□□□ -0.26
CLK3-204ENST00000483723 PRM3Q9NNZ6 103 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ARMC1Q9NVT9 282 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 RIMS3Q9UJD0 308 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 AP4S1Q9Y587 144 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 PCDHGA4Q9Y5G9 962 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 PCDHGA2Q9Y5H1 932 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ENTPD2Q9Y5L3 495 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 OR2A25A4D2G3 310 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 STK25O00506 426 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 NVLO15381 856 aaKnown RBP13.41□□□□□ -0.26
CLK3-204ENST00000483723 MAP3K13O43283 966 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 GBAP04062 536 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 MAOBP27338 520 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 HOXA6P31267 233 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 TRA2BP62995 288 aaKnown RBP13.41□□□□□ -0.26
CLK3-204ENST00000483723 MC1RQ01726 317 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 RPL6Q02878 288 aaKnown RBP13.41□□□□□ -0.26
CLK3-204ENST00000483723 RELAQ04206 551 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 CCNYL2Q5T2Q4 361 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 GLYATQ6IB77 296 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 ANKRD26P1Q6NSI1 321 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 SPPL2CQ8IUH8 684 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 TRIM48Q8IWZ4 208 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 RBM12BQ8IXT5 1001 aaKnown RBP13.41□□□□□ -0.26
CLK3-204ENST00000483723 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 ZNF548Q8NEK5 533 aaPredicted RBP13.41□□□□□ -0.26
CLK3-204ENST00000483723 VPS37AQ8NEZ2 397 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 OR52E4Q8NGH9 312 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 CDC26Q8NHZ8 85 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 ZNF764Q96H86 408 aaPredicted RBP13.41□□□□□ -0.26
CLK3-204ENST00000483723 TM9SF3Q9HD45 589 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 DLGAP2Q9P1A6 1054 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 ANKMY1Q9P2S6 941 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 APOBEC3BQ9UH17 382 aaKnown RBP13.41□□□□□ -0.26
CLK3-204ENST00000483723 MAGEL2Q9UJ55 1249 aa13.41□□□□□ -0.26
CLK3-204ENST00000483723 MDC1Q14676 2089 aaKnown RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 RTCAO00442 366 aaKnown RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 PEX1O43933 1283 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 GPR37L1O60883 481 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 GSNP06396 782 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 DCNP07585 359 aaKnown RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 UMPSP11172 480 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 UGT2B7P16662 529 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 GPX2P18283 190 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 GGT1P19440 569 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 ABHD18Q0P651 414 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms