RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 NIP7Q9Y221 180 aaKnown RBP eCLIP3.37□□□□□ -1.87
GTF3A-207ENST00000482655 MMP24Q9Y5R2 645 aa3.37□□□□□ -1.87
GTF3A-207ENST00000482655 ABCC4O15439 1325 aa3.37□□□□□ -1.87
GTF3A-207ENST00000482655 LAMA3Q16787 3333 aa3.37□□□□□ -1.87
GTF3A-207ENST00000482655 WDR81Q562E7 1941 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 RANBP2P49792 3224 aaKnown RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 TRIOBPQ9H2D6 2365 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 TEX13DA0A0J9YY54 714 aaPredicted RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 LRRD1A4D1F6 860 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 A4D1N5 150 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ERI2A8K979 691 aaKnown RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 SLC30A4O14863 429 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 FMO6PO60774 539 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CRCPO75575 148 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 WDPCPO95876 746 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CSN3P07498 182 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 PRSS56P0CW18 603 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 SMIM18P0DKX4 95 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 HAPLN1P10915 354 aaPredicted RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ACP2P11117 423 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 EPORP19235 508 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ALDH1B1P30837 517 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 HNF4AP41235 474 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 RGS7P49802 495 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 MTCP1P56278 107 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 UBASH3AP57075 661 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 KLC1Q07866 573 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ILF2Q12905 390 aaKnown RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ITGA7Q13683 1181 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 RCN2Q14257 317 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 TAF13Q15543 124 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 NPTX1Q15818 432 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 PKN2Q16513 984 aaKnown RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CDC37Q16543 378 aaPredicted RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 PHKG1Q16816 387 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ODF4Q2M2E3 257 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 C2orf76Q3KRA6 126 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ZC2HC1CQ53FD0 456 aaPredicted RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 GLRA4Q5JXX5 417 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CCDC158Q5M9N0 1113 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 NRARPQ7Z6K4 114 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ZNF554Q86TJ5 538 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 AMIGO1Q86WK6 493 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 APLFQ8IW19 511 aaPredicted RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 FAM219AQ8IW50 185 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CDK20Q8IZL9 346 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 NDUFAF2Q8N183 169 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CRYBG2Q8N1P7 616 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 VANGL1Q8TAA9 524 aaPredicted RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 FIBINQ8TAL6 211 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CD99L2Q8TCZ2 262 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 SLC26A7Q8TE54 656 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 UBLCP1Q8WVY7 318 aaPredicted RBP3.36□□□□□ -1.87
GTF3A-207ENST00000482655 RAD54LQ92698 747 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 TEKT1Q969V4 418 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 SPATA33Q96N06 139 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 MYADMQ96S97 322 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 MINDY3Q9H8M7 445 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 TUFT1Q9NNX1 390 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 GSN-AS1Q9NRJ2 163 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ECHDC1Q9NTX5 307 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 SEPT10Q9P0V9 454 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 ATP6V0A2Q9Y487 856 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 TRIM17Q9Y577 477 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 CDHR2Q9BYE9 1310 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 OTOFQ9HC10 1997 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 UNC80Q8N2C7 3258 aa3.36□□□□□ -1.87
GTF3A-207ENST00000482655 EYSQ5T1H1 3165 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 KIAA0100Q14667 2235 aaKnown RBP3.35□□□□□ -1.87
GTF3A-207ENST00000482655 TRAV24A0A0B4J272 114 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 C5orf60A6NFR6 353 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 DUXAA6NLW8 204 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 E9PI62 339 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 PLOD2O00469 737 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 IGLV1-44P01699 117 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 JAK1P23458 1154 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 EPHA2P29317 976 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 PTGER4P35408 488 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 ATP6V1E1P36543 226 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 MFAP3P55082 362 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 STX1BP61266 288 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 MAT1AQ00266 395 aaKnown RBP3.35□□□□□ -1.87
GTF3A-207ENST00000482655 DMPKQ09013 629 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 TEFQ10587 303 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 TNK1Q13470 666 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 FUT11Q495W5 492 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 SLC10A5Q5PT55 438 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 NOTUMQ6P988 496 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 CORO6Q6QEF8 472 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 GBP6Q6ZN66 633 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 MYPOPQ86VE0 399 aaPredicted RBP3.35□□□□□ -1.87
GTF3A-207ENST00000482655 LGI2Q8N0V4 545 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 CLYBLQ8N0X4 340 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 RASGEF1AQ8N9B8 481 aa3.35□□□□□ -1.87
GTF3A-207ENST00000482655 NOA1Q8NC60 698 aaKnown RBP3.35□□□□□ -1.87
GTF3A-207ENST00000482655 NPEPL1Q8NDH3 523 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms