RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ITGAMP11215 1152 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 NPPBP16860 134 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 IRS1P35568 1242 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 SLBPQ14493 270 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS52-217ENST00000478934 ADCK1Q86TW2 530 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 P2RY8Q86VZ1 359 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 TRAPPC5Q8IUR0 188 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 DNAJB8Q8NHS0 232 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 APH1BQ8WW43 257 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 DNASE1L2Q92874 299 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 TOX2Q96NM4 488 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 ZNF347Q96SE7 839 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 CCM2Q9BSQ5 444 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 RUBCNLQ9H714 662 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 MAP4K5Q9Y4K4 846 aa10.39□□□□□ -0.75
VPS52-217ENST00000478934 OTOL1A6NHN0 477 aaPredicted RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 H3BM21 787 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 C1orf105O95561 183 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 CCDC159P0C7I6 412 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 PORP16435 677 aaPredicted RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 ZNF30P17039 623 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 IL1RNP18510 177 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 FPR1P21462 350 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 MMP12P39900 470 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 VIPR2P41587 438 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 SLC6A11P48066 632 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 ARHGDIAP52565 204 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 MVDP53602 400 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 CRISP3P54108 245 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 ZNF805Q5CZA5 627 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 CAPN13Q6MZZ7 669 aaPredicted RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 NPAS3Q8IXF0 933 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 NLGN4XQ8N0W4 816 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 OR56A3Q8NH54 315 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 RSPRY1Q96DX4 576 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 ZSCAN5AQ9BUG6 496 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 REEP1Q9H902 201 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 ACOT13Q9NPJ3 140 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 FAM120CQ9NX05 1096 aaKnown RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 NDRG4Q9ULP0 352 aaKnown RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 AP3M1Q9Y2T2 418 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 NAALAD2Q9Y3Q0 740 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 CFAP20Q9Y6A4 193 aaKnown RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 PRRT4C9JH25 899 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 NPIPB8E9PQR5 432 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 MMP20O60882 483 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 SERPINB7O75635 380 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 GABARAPO95166 117 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 CATP04040 527 aaKnown RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 PRLHRP49683 370 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 NFE2L1Q14494 772 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 MAD2L1BPQ15013 274 aaPredicted RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 ZNF77Q15935 545 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 ZC3H12BQ5HYM0 836 aaKnown RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 ZDHHC20Q5W0Z9 365 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 TTC23LQ6PF05 361 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 PAGE2Q7Z2X7 111 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 COMMD6Q7Z4G1 85 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 ENTHD1Q8IYW4 607 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 PAWRQ96IZ0 340 aaKnown RBP10.38□□□□□ -0.75
VPS52-217ENST00000478934 FEVQ99581 238 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 DUSP21Q9H596 190 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 AKIP1Q9NQ31 210 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 TAS2R16Q9NYV7 291 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 RHCGQ9UBD6 479 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 RPS6KA6Q9UK32 745 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 TMEM98Q9Y2Y6 226 aa10.38□□□□□ -0.75
VPS52-217ENST00000478934 RTCAO00442 366 aaKnown RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 KPNA5O15131 536 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SUV39H1O43463 412 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 RGS10O43665 173 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 JRKO75564 520 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 MYO1DO94832 1006 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 KLK1P06870 262 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 IMPDH2P12268 514 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 CD36P16671 472 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 CEBPBP17676 345 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 PPM1AP35813 382 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 LIPAP38571 399 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SLC19A1P41440 591 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 IDH2P48735 452 aaKnown RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 RPS26P62854 115 aaKnown RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 NPRL3Q12980 569 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SLC13A2Q13183 592 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 TOP3AQ13472 1001 aaPredicted RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 CAMK2GQ13555 558 aaPredicted RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 FAM83HQ6ZRV2 1179 aaPredicted RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 DPPA4Q7L190 304 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 TRMT11Q7Z4G4 463 aaKnown RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 ZNF547Q8IVP9 402 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SLC5A8Q8N695 610 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 ZBTB8BQ8NAP8 495 aaPredicted RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 NFKBIDQ8NI38 313 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 PSMA8Q8TAA3 256 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 GABARAPL1Q9H0R8 117 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 ABCG4Q9H172 646 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 NDUFAF4Q9P032 175 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 C5AR2Q9P296 337 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 FAM227AF5H4B4 570 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms