RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 FCGR3BO75015 233 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PRKRAO75569 313 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PGLSO95336 258 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 EEF2P13639 858 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PAX1P15863 534 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 EIF2S2P20042 333 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 EFNA1P20827 205 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 CA4P22748 312 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 OAS2P29728 719 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 CDX1P47902 265 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 DVL1P1P54792 670 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 MTCP1P56278 107 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 B3GALT5-AS1P59052 145 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 KLC1Q07866 573 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 NFE2L1Q14494 772 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PHLDA2Q53GA4 152 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 LACTB2Q53H82 288 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 LBHQ53QV2 105 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 SUSD4Q5VX71 490 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 IL17RELQ6ZVW7 336 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 COPS6Q7L5N1 327 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PHLDB2Q86SQ0 1253 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 MMD2Q8IY49 270 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 NDUFAF2Q8N183 169 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 NUP93Q8N1F7 819 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC24A4Q8NFF2 622 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 OR11H4Q8NGC9 324 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 OLIG1Q8TAK6 271 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PHLDA1Q8WV24 401 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PTP4A1Q93096 173 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 ST6GAL2Q96JF0 529 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM71F1Q96KD3 344 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PARK7Q99497 189 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 TRAF4Q9BUZ4 470 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 UTP14AQ9BVJ6 771 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC2A11Q9BYW1 496 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 PANK2Q9BZ23 570 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 LAT2Q9GZY6 243 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 GFRA4Q9GZZ7 299 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 MIS12Q9H081 205 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 S1PR5Q9H228 398 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 TFB2MQ9H5Q4 396 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 TRPV4Q9HBA0 871 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 TUFT1Q9NNX1 390 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 A4GALTQ9NPC4 353 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 SDR39U1Q9NRG7 319 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 GSN-AS1Q9NRJ2 163 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 VPS18Q9P253 973 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 ARMCX3Q9UH62 379 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 TMED3Q9Y3Q3 217 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 JRKLQ9Y4A0 524 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 DOCK1Q14185 1865 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 ABCC4O15439 1325 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 MGAMO43451 1857 aa3.65□□□□□ -1.82
CDC42BPA-212ENST00000478573 NAV1Q8NEY1 1877 aa3.65□□□□□ -1.82
CDC42BPA-212ENST00000478573 LOC101059948A0A1B0GTJ6 334 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 GLTPD2A6NH11 291 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 ARPC2O15144 300 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 SELENOFO60613 162 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 GSRP00390 522 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 C9P02748 559 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 RLN1P04808 185 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 PCCAP05165 728 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF883P0CG24 379 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGHV4-38-2P0DP08 117 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 GP1BBP13224 206 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 LIFP15018 202 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 JAK1P23458 1154 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 SOAT1P35610 550 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 DCTP40126 519 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 VAMP7P51809 220 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 GSDMDP57764 484 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 ILF2Q12905 390 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 FCN2Q15485 313 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 TAZQ16635 292 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 CTU2Q2VPK5 515 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 ODF2Q5BJF6 829 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 TECRLQ5HYJ1 363 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 IYDQ6PHW0 289 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 NHLRC1Q6VVB1 395 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 GBP6Q6ZN66 633 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 HOOK3Q86VS8 718 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 KLHL7Q8IXQ5 586 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 CCDC170Q8IYT3 715 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 TMCO5AQ8N6Q1 288 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF713Q8N859 430 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 MAPKAPK5-AS1Q8N8E1 139 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 OR7G3Q8NG95 312 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 OR4K1Q8NGD4 311 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 OR52N5Q8NH56 324 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 AFAP1L1Q8TED9 768 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 SEPT1Q8WYJ6 367 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 P2RX5Q93086 422 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF501Q96CX3 271 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 THOC1Q96FV9 657 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 PRRG4Q9BZD6 226 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 TMEM206Q9H813 350 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 FGF21Q9NSA1 209 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms