RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 OR5K1Q8NHB7 308 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SLC22A17Q8WUG5 538 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SELENOMQ8WWX9 145 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 FIG4Q92562 907 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HDAC2Q92769 488 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NELL1Q92832 810 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 EDAQ92838 391 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TMBIM1Q969X1 311 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DACT3Q96B18 629 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TMIGD2Q96BF3 282 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TESCQ96BS2 214 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ISOC1Q96CN7 298 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ECHDC3Q96DC8 303 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 FAM120BQ96EK7 910 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NRBF2Q96F24 287 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SLC47A1Q96FL8 570 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SCRN2Q96FV2 425 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CMTM7Q96FZ5 175 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 AURKBQ96GD4 344 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 MAGED4Q96JG8 741 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HIST1H2AHQ96KK5 128 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF641Q96N77 438 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 OR52E6Q96RD3 313 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 MCCC1Q96RQ3 725 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SLC22A12Q96S37 553 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HBEGFQ99075 208 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DOK1Q99704 481 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HIST1H2AJQ99878 128 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 RBM4BQ9BQ04 359 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CPPED1Q9BRF8 314 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 H2AFJQ9BTM1 129 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 THUMPD3Q9BV44 507 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 RBM4Q9BWF3 364 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 OSBPL10Q9BXB5 764 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SLC12A9Q9BXP2 914 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CPEB1Q9BZB8 566 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PAIP1Q9H074 479 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DUSP15Q9H1R2 295 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ACTR8Q9H981 624 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NTN4Q9HB63 628 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PARVBQ9HBI1 364 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HPS4Q9NQG7 708 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DDX18Q9NVP1 670 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ARL15Q9NXU5 204 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SPG21Q9NZD8 308 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 VAPAQ9P0L0 249 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CFAP97Q9P2B7 532 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 IFT80Q9P2H3 777 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SLC25A13Q9UJS0 675 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 BLOC1S6Q9UL45 172 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 MAPRE3Q9UPY8 281 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HS3ST2Q9Y278 367 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 V9GYQ6 96 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 USP9XQ93008 2570 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NUP214P35658 2090 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DOCK6Q96HP0 2047 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KCNE1BA0A087WTH5 132 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TRAV20A0A0B4J274 112 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 A0A1B0GVG6 124 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ABHD14A-ACY1A0A1B0GW23 586 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 A0A1W2PQU0 124 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KLHL33A6NCF5 533 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 NPIPB15A6NHN6 443 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 G3V2T6 193 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 QSOX1O00391 747 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 GNGT2O14610 69 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KIAA0355O15063 1070 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 UGDHO60701 494 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF821O75541 412 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CREG1O75629 220 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DNAJB5O75953 348 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 AP2A2O94973 939 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 POP4O95707 220 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CST1P01037 141 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 PDYNP01213 254 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 LRG1P02750 347 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 EPHX1P07099 455 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 C1SP09871 688 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF30P17039 623 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 HOXB9P17482 250 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 AOAHP28039 575 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 AVPR2P30518 371 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 GKP32189 559 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CCR7P32248 378 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CD70P32970 193 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 PPM1AP35813 382 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 GDF5P43026 501 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 MAPK9P45984 424 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 SLC6A12P48065 614 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TRPC1P48995 793 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 SPINT3P49223 89 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 GZMMP51124 257 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 RAD23AP54725 363 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TPD52P55327 224 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DCDC1P59894 354 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 POLR2LP62875 67 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZXDBP98169 803 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CYP4F8P98187 520 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 HMGCS1Q01581 520 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TLE2Q04725 743 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms