RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ZNF33BQ06732 778 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 IFT88Q13099 833 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 FAM53BQ14153 422 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 ABRAXAS2Q15018 415 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 MUM1Q2TAK8 710 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 FAM214AQ32MH5 1076 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 SGO1Q5FBB7 561 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 TOR1AIP1Q5JTV8 583 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 SH2D4BQ5SQS7 431 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 ATG16L1Q676U5 607 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 TTC19Q6DKK2 380 aaPredicted RBP18.96■□□□□ 0.63
ACTB-210ENST00000477812 ZNF517Q6ZMY9 492 aaPredicted RBP18.96■□□□□ 0.63
ACTB-210ENST00000477812 RGS9BPQ6ZS82 235 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 UBE3DQ7Z6J8 389 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 ZNF781Q8N8C0 355 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 UTP15Q8TED0 518 aaKnown RBP18.96■□□□□ 0.63
ACTB-210ENST00000477812 CMTM7Q96FZ5 175 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 GBP5Q96PP8 586 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 F2RL3Q96RI0 385 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 HBEGFQ99075 208 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 THSD1Q9NS62 852 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 THAP1Q9NVV9 213 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 FAM53CQ9NYF3 392 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 DHCR7Q9UBM7 475 aaKnown RBP18.96■□□□□ 0.63
ACTB-210ENST00000477812 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.96■□□□□ 0.63
ACTB-210ENST00000477812 RAP2CQ9Y3L5 183 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 TRAF6Q9Y4K3 522 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 DNAJC15Q9Y5T4 150 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 A0A1B0GX78 115 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 SERTM1A2A2V5 107 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 TGFB1P01137 390 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 ZNF888P0CJ79 500 aaPredicted RBP18.95■□□□□ 0.62
ACTB-210ENST00000477812 CD82P27701 267 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 SERPINB3P29508 390 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 TBC1D25Q3MII6 688 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 TMEM35AQ53FP2 167 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 KHDRBS2Q5VWX1 349 aaKnown RBP18.95■□□□□ 0.62
ACTB-210ENST00000477812 TTLL10Q6ZVT0 673 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 PRSS41Q7RTY9 318 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 TIPARPQ7Z3E1 657 aaKnown RBP18.95■□□□□ 0.62
ACTB-210ENST00000477812 PDSS2Q86YH6 399 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 CLYBLQ8N0X4 340 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 ZCCHC10Q8TBK6 192 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 PROKR1Q8TCW9 393 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 AGR3Q8TD06 166 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 SELENOMQ8WWX9 145 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 CCT6BQ92526 530 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 GAL3ST3Q96A11 431 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 MTFMTQ96DP5 389 aaKnown RBP18.95■□□□□ 0.62
ACTB-210ENST00000477812 ZNF578Q96N58 590 aaPredicted RBP18.95■□□□□ 0.62
ACTB-210ENST00000477812 REXO4Q9GZR2 422 aaKnown RBP18.95■□□□□ 0.62
ACTB-210ENST00000477812 OR51B5Q9H339 312 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 TUBB1Q9H4B7 451 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 BRF2Q9HAW0 419 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 LHX9Q9NQ69 397 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 AK5Q9Y6K8 562 aa18.95■□□□□ 0.62
ACTB-210ENST00000477812 FRYQ5TBA9 3013 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 TEX51A0A1B0GUA7 166 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 ULK1O75385 1050 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 ONECUT2O95948 504 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 CAPNS1P04632 268 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 HBQ1P09105 142 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 HSD3B1P14060 373 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 HSD3B2P26439 372 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 STXBP1P61764 594 aaKnown RBP18.94■□□□□ 0.62
ACTB-210ENST00000477812 PHEXP78562 749 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 CSTF3Q12996 717 aaKnown RBP18.94■□□□□ 0.62
ACTB-210ENST00000477812 CUL3Q13618 768 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 MAP7Q14244 749 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 NDUFA9Q16795 377 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 DEPDC1Q5TB30 811 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 TRIM46Q7Z4K8 759 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 ZFAND4Q86XD8 727 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 DTX1Q86Y01 620 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 DSELQ8IZU8 1212 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 GALNT6Q8NCL4 622 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 OR2L5Q8NG80 312 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 FAM76AQ8TAV0 307 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 DYDC1Q8WWB3 177 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 MVB12AQ96EY5 273 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 MAGEB18Q96M61 343 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 ZNF717Q9BY31 904 aaPredicted RBP18.94■□□□□ 0.62
ACTB-210ENST00000477812 ACPTQ9BZG2 426 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 ILKAPQ9H0C8 392 aaPredicted RBP18.94■□□□□ 0.62
ACTB-210ENST00000477812 SLC22A11Q9NSA0 550 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 DKK4Q9UBT3 224 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 CCL27Q9Y4X3 112 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 PTGDR2Q9Y5Y4 395 aa18.94■□□□□ 0.62
ACTB-210ENST00000477812 MEN1O00255 615 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 ERI3O43414 337 aaKnown RBP18.93■□□□□ 0.62
ACTB-210ENST00000477812 GALR3O60755 368 aaPredicted RBP18.93■□□□□ 0.62
ACTB-210ENST00000477812 CRCPO75575 148 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 SEMA3DO95025 777 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 SCELO95171 688 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 B3GALT4O96024 378 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 ALOX12P18054 663 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 IL1RNP18510 177 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 PTX3P26022 381 aaPredicted RBP18.93■□□□□ 0.62
ACTB-210ENST00000477812 HERC3Q15034 1050 aa18.93■□□□□ 0.62
ACTB-210ENST00000477812 C1orf189Q5VU69 101 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms