RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 C11orf54Q9H0W9 315 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 TNKS2Q9H2K2 1166 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 ELAC1Q9H777 363 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 COX16Q9P0S2 106 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 MYEF2Q9P2K5 600 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 BTNL2Q9UIR0 455 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 OGDHLQ9ULD0 1010 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 V9GYH0 126 aa12.23□□□□□ -0.45
RTFDC1-207ENST00000477573 H3BM21 787 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC28A1O00337 649 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 PRMT5O14744 637 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 LILRB5O75023 590 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 TULP3O75386 442 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 PAGE1O75459 146 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 OAZ2O95190 189 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 MT-ND2P03891 347 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 RB1P06400 928 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 GOT1P17174 413 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 ATP5F1P24539 256 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 OR1G1P47890 313 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 LIMK1P53667 647 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 NRLP54845 237 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 AP1S1P61966 158 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 KCNJ10P78508 379 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 DEFA6Q01524 100 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 FOXM1Q08050 763 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 GPR17Q13304 367 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 TRIP4Q15650 581 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 CLLU1OSQ5K130 101 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 SYPL2Q5VXT5 272 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 CRTC1Q6UUV9 634 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 LRRC17Q8N6Y2 441 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 NLGN4YQ8NFZ3 816 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 RNF139Q8WU17 664 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 EXOSC8Q96B26 276 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 CCDC126Q96EE4 140 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 CCM2Q9BSQ5 444 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 DPCDQ9BVM2 203 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 GATA5Q9BWX5 397 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 DNTTIP1Q9H147 329 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 G3V2L1 256 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 UPK1AO00322 258 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 KPNA3O00505 521 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 INPP4BO15327 924 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC31A2O15432 143 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 FABP7O15540 132 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 POP7O75817 140 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 RAC2P15153 192 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 TIMP2P16035 220 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 SCAPQ12770 1279 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 DSG2Q14126 1118 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 HEATR6Q6AI08 1181 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 POMZP3Q6PJE2 187 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 HFE2Q6ZVN8 426 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC22A9Q8IVM8 553 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 SVOPLQ8N434 492 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 LINC01599Q8WXQ3 324 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 USP7Q93009 1102 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 RBM4BQ9BQ04 359 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 GSDMCQ9BYG8 508 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 AMBRA1Q9C0C7 1298 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 ANKRD19PQ9H560 264 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 EMC7Q9NPA0 242 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 RAB6BQ9NRW1 208 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 GKN1Q9NS71 199 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 PIGVQ9NUD9 493 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 DDIT4Q9NX09 232 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 KCMF1Q9P0J7 381 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 MUTYHQ9UIF7 546 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 PHF11Q9UIL8 331 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 ZMIZ1Q9ULJ6 1067 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 PCDHB7Q9Y5E2 793 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
RTFDC1-207ENST00000477573 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 ORC5O43913 435 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 FADS2O95864 444 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 CYBBP04839 570 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 RFC3P40938 356 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 MAGEA6P43360 314 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 KCNAB2Q13303 367 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 RNF212Q495C1 297 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 AGKQ53H12 422 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 KLHL26Q53HC5 615 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 OTUD1Q5VV17 481 aaPredicted RBP12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 FAM92BQ6ZTR7 304 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 NLRP8Q86W28 1048 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 ZNF280BQ86YH2 543 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 MS4A15Q8N5U1 240 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 OR8D4Q8NGM9 314 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 TMBIM1Q969X1 311 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 MYO19Q96H55 970 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 MCCC1Q96RQ3 725 aaPredicted RBP12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 TREX2Q9BQ50 279 aaPredicted RBP12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 DPH7Q9BTV6 452 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 CPEB1Q9BZB8 566 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 CRLF2Q9HC73 371 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms