RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 NMRAL1Q9HBL8 299 aa16.72■□□□□ 0.27
PTPN7-209ENST00000477554 ZNF358Q9NW07 568 aa16.72■□□□□ 0.27
PTPN7-209ENST00000477554 ZNF282Q9UDV7 671 aaPredicted RBP16.72■□□□□ 0.27
PTPN7-209ENST00000477554 C3orf18Q9UK00 162 aa16.72■□□□□ 0.27
PTPN7-209ENST00000477554 GRID1Q9ULK0 1009 aa16.72■□□□□ 0.27
PTPN7-209ENST00000477554 HEMK1Q9Y5R4 338 aaPredicted RBP16.72■□□□□ 0.27
PTPN7-209ENST00000477554 CCDC189A1A4V9 331 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 LRRC14BA6NHZ5 514 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 UBXN8O00124 270 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 NDUFS4O43181 175 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 RDH16O75452 317 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 SERPIND1P05546 499 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 CREB1P16220 341 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 TFEBP19484 476 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 CD22P20273 847 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 HNF4AP41235 474 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 SCTRP47872 440 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 GLRBP48167 497 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 EMP3P54852 163 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 ATP6V0D1P61421 351 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 TLE1Q04724 770 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 IGFBP7Q16270 282 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 GARNL3Q5VVW2 1013 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 NXPE4Q6UWF7 544 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 MED25Q71SY5 747 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 GPSM1Q86YR5 675 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 PLD6Q8N2A8 252 aaKnown RBP16.71■□□□□ 0.27
PTPN7-209ENST00000477554 TMEM102Q8N9M5 508 aaPredicted RBP16.71■□□□□ 0.27
PTPN7-209ENST00000477554 OR11G2Q8NGC1 345 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 ATL1Q8WXF7 558 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 KIAA1191Q96A73 305 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 MIEF2Q96C03 454 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 ATOH8Q96SQ7 321 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 KCNK9Q9NPC2 374 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 CSAG2Q9Y5P2 127 aa16.71■□□□□ 0.27
PTPN7-209ENST00000477554 TRBC2A0A5B9 178 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PABPN1LA6NDY0 278 aaKnown RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 IDSB3KWA1 339 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 H3BQF6 201 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 TYROBPO43914 113 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 SPAG7O75391 227 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 TBX6O95947 436 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 HRH2P25021 359 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 SLC18A1P54219 525 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 MLLT10P55197 1068 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 EEF1A2Q05639 463 aaKnown RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 ACAP2Q15057 778 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PRR30Q53SZ7 412 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 SLCO4C1Q6ZQN7 724 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 VN1R5Q7Z5H4 357 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PARP9Q8IXQ6 854 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 KLHDC8AQ8IYD2 350 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 GPR78Q96P69 363 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 SARGQ9BW04 601 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 ZNF552Q9H707 407 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PTBP2Q9UKA9 531 aaKnown RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 NAALAD2Q9Y3Q0 740 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PCDHGA9Q9Y5G4 932 aaKnown RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 IGHV3-20A0A0C4DH32 117 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 J3QKU1 62 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 TM9SF1O15321 606 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 KLHL18O94889 574 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 ZWINTO95229 277 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 RBP1P09455 135 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 ZNF888P0CJ79 500 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PIM1P11309 404 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 MTHFD2P13995 350 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 HPDP32754 393 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PGDP52209 483 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PPP2R2AP63151 447 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 OCA2Q04671 838 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 FAM53BQ14153 422 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 RBBP7Q16576 425 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 CCDC153Q494R4 210 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 ATG9BQ674R7 924 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 LANCL3Q6ZV70 420 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 GALNT16Q8N428 558 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 RBMXL3Q8N7X1 1067 aaKnown RBP16.7■□□□□ 0.26
PTPN7-209ENST00000477554 CREB3L4Q8TEY5 395 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 WWOXQ9NZC7 414 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 CD274Q9NZQ7 290 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 RNF112Q9ULX5 631 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 PLLPQ9Y342 182 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 DYRK1BQ9Y463 629 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 MAP4K5Q9Y4K4 846 aa16.7■□□□□ 0.26
PTPN7-209ENST00000477554 COL12A1Q99715 3063 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 A0A0G2JN53 185 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 PEX12O00623 359 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 CDC123O75794 336 aaPredicted RBP16.69■□□□□ 0.26
PTPN7-209ENST00000477554 BMP10O95393 424 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 NSA2O95478 260 aaKnown RBP16.69■□□□□ 0.26
PTPN7-209ENST00000477554 COX6A1P12074 109 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 RAB8AP61006 207 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 SLBPQ14493 270 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTPN7-209ENST00000477554 RBBP5Q15291 538 aaKnown RBP16.69■□□□□ 0.26
PTPN7-209ENST00000477554 AFAP1L2Q8N4X5 818 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 CAMKVQ8NCB2 501 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 PDPRQ8NCN5 879 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms