RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FBXW2Q9UKT8 454 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 VPS9D1Q9Y2B5 631 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 NCKAP5O14513 1909 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SPG11Q96JI7 2443 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 TRBV11-1A0A0K0K1C0 115 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 FAM237BA0A1B0GVD1 139 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 BTNL10A8MVZ5 291 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 G3V3Y1 287 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ACOT7O00154 380 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 AP3B1O00203 1094 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 CHST10O43529 356 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 OR1F1O43749 312 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 CEP104O60308 925 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TOXO94900 526 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 FHP07954 510 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF888P0CJ79 500 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 MPC1LP0DKB6 136 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 CDH1P12830 882 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 HOXB4P17483 251 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 OGNP20774 298 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 MAOAP21397 527 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 HRH2P25021 359 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 RPL22P35268 128 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 VPS41P49754 854 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 HLCSP50747 726 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 CLCN7P51798 805 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 DGKQP52824 942 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 NUP107P57740 925 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 MLF1P58340 268 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 BTG2P78543 158 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 RELAQ04206 551 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 FOLH1Q04609 750 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 KIF5AQ12840 1032 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 CTBP1Q13363 440 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 SNTB1Q13884 538 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 GBX1Q14549 363 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 HERC3Q15034 1050 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 OASLQ15646 514 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ARHGAP11AQ6P4F7 1023 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 PAOXQ6QHF9 649 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 RAD9BQ6WBX8 426 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 MBOAT1Q6ZNC8 495 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ACAD11Q709F0 780 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 Q71RC1 249 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TAOK1Q7L7X3 1001 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 WDR53Q7Z5U6 358 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TGIF2LYQ8IUE0 185 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 CHERPQ8IWX8 916 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 DMRTC2Q8IXT2 367 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 LGI4Q8N135 537 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TBC1D19Q8N5T2 526 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 PLPP5Q8NEB5 264 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ARMC2Q8NEN0 867 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 OR52N2Q8NGI0 321 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 LILRB4Q8NHJ6 448 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ELP5Q8TE02 316 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF669Q96BR6 464 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TBC1D20Q96BZ9 403 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 THAP11Q96EK4 314 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 RMND5BQ96G75 393 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 OR1F2PQ96R84 312 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TCF12Q99081 682 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 GPR21Q99679 349 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC30A3Q99726 388 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 CCDC77Q9BR77 488 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 DESI2Q9BSY9 194 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TSGA10Q9BZW7 698 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 PCBD2Q9H0N5 130 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 GSX1Q9H4S2 264 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 EXO5Q9H790 373 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 PRM3Q9NNZ6 103 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 TIMMDC1Q9NPL8 285 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 PNO1Q9NRX1 252 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 LANCL2Q9NS86 450 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 ALKBH4Q9NXW9 302 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 KCMF1Q9P0J7 381 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 KCNN3Q9UGI6 736 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 SOX13Q9UN79 622 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 SH2B3Q9UQQ2 575 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 DRG1Q9Y295 367 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 PLEKHA6Q9Y2H5 1048 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 COMMD10Q9Y6G5 202 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 PRRC2AP48634 2157 aaKnown RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 MAP1AP78559 2803 aaPredicted RBP6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 FREM3P0C091 2139 aa6.25□□□□□ -1.41
RTFDC1-206ENST00000477485 AKAP6Q13023 2319 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 KCNE1BA0A087WTH5 132 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 SAGE2PA6NJ88 616 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 LCMT2O60294 686 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 AVILO75366 819 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ITGA10O75578 1167 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 MYO1DO94832 1006 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 TUBB4AP04350 444 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 HOXD4P09016 255 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 HIST1H2AGP0C0S8 130 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ENO3P13929 434 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ALOX12P18054 663 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 HIST1H2ADP20671 130 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 PTMSP20962 102 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 SAT1P21673 171 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms