RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 HACD2Q6Y1H2 254 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 COMMD6Q7Z4G1 85 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 R3HCC1LQ7Z5L2 792 aaKnown RBP11.7□□□□□ -0.54
MRPL55-227ENST00000475832 NUDT13Q86X67 352 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 RNF175Q8N4F7 328 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 ANKRD53Q8N9V6 530 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 CAMKVQ8NCB2 501 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 OR9I1Q8NGQ6 314 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 DNAJB8Q8NHS0 232 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 CDC26Q8NHZ8 85 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 PROKR1Q8TCW9 393 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 ZDHHC12Q96GR4 267 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 TBC1D10AQ9BXI6 508 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 ROGDIQ9GZN7 287 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 OR51B5Q9H339 312 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 SEMA6CQ9H3T2 930 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 GAREM1Q9H706 876 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 RMND5AQ9H871 391 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 LRIT1Q9P2V4 623 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 MCM8Q9UJA3 840 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 POMT2Q9UKY4 750 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 KLK4Q9Y5K2 254 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 SPEGQ15772 3267 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 ZZEF1O43149 2961 aa11.7□□□□□ -0.54
MRPL55-227ENST00000475832 LRP4O75096 1905 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 A0A088AWK7 358 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 IGKV1-8A0A0C4DH67 115 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 OR2A25A4D2G3 310 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 GSC2O15499 205 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 DUX1O43812 170 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 SH3BGRLO75368 114 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 NPPAP01160 153 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 SDC1P18827 310 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 MAGP20916 626 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ZNF10P21506 573 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 S100A3P33764 101 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 BCL6P41182 706 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 TSFMP43897 325 aaKnown RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 YBX1P67809 324 aaKnown RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 SLC25A3Q00325 362 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 SRSF11Q05519 484 aaKnown RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 FOXM1Q08050 763 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ZNF763Q0D2J5 394 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 LRRC74AQ0VAA2 488 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 PWP1Q13610 501 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 NFYCQ13952 458 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 PTGR1Q14914 329 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 SUZ12Q15022 739 aaKnown RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 NR0B2Q15466 257 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 INAVAQ3KP66 663 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 VPS26BQ4G0F5 336 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ZC3H12BQ5HYM0 836 aaKnown RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 CCNYL2Q5T2Q4 361 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 IRGCQ6NXR0 463 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 TRIM40Q6P9F5 258 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 MSANTD1Q6ZTZ1 278 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 IKBIPQ70UQ0 350 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ASPGQ86U10 573 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ZNF761Q86XN6 746 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 PLD3Q8IV08 490 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 FUNDC1Q8IVP5 155 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 DSELQ8IZU8 1212 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 PGAM4Q8N0Y7 254 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 TMEM132CQ8N3T6 1108 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 SLC25A45Q8N413 288 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 VPS37AQ8NEZ2 397 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 BAHD1Q8TBE0 780 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 SLC13A3Q8WWT9 602 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 TSSK3Q96PN8 268 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 CD180Q99467 661 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 NPAS2Q99743 824 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 HOPXQ9BPY8 73 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ZFYVE21Q9BQ24 234 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 CCDC3Q9BQI4 270 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 EBPLQ9BY08 206 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 REXO4Q9GZR2 422 aaKnown RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 TWSG1Q9GZX9 223 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 WDR41Q9HAD4 459 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 C1GALT1Q9NS00 363 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 ADAM29Q9UKF5 820 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 CROTQ9UKG9 612 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 PRPF19Q9UMS4 504 aaKnown RBP11.69□□□□□ -0.54
MRPL55-227ENST00000475832 DLGAP4Q9Y2H0 992 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 IGF2RP11717 2491 aa11.69□□□□□ -0.54
MRPL55-227ENST00000475832 PCDH15Q96QU1 1955 aa11.68□□□□□ -0.54
MRPL55-227ENST00000475832 PI4KAP42356 2102 aa11.68□□□□□ -0.54
MRPL55-227ENST00000475832 ANKRD12Q6UB98 2062 aa11.68□□□□□ -0.54
MRPL55-227ENST00000475832 C15orf38-AP3S2A0A0A6YYH1 394 aa11.68□□□□□ -0.54
MRPL55-227ENST00000475832 SAP18O00422 153 aaKnown RBP11.68□□□□□ -0.54
MRPL55-227ENST00000475832 TXNDC9O14530 226 aa11.68□□□□□ -0.54
MRPL55-227ENST00000475832 ARHGAP33O14559 1287 aa11.68□□□□□ -0.54
MRPL55-227ENST00000475832 CDX4O14627 284 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-227ENST00000475832 TM4SF5O14894 197 aa11.68□□□□□ -0.54
MRPL55-227ENST00000475832 CAPN5O15484 640 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-227ENST00000475832 LCMT2O60294 686 aaKnown RBP11.68□□□□□ -0.54
MRPL55-227ENST00000475832 EEDO75530 441 aaKnown RBP11.68□□□□□ -0.54
MRPL55-227ENST00000475832 ETHE1O95571 254 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms