RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 VN1R4Q7Z5H5 301 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 UBE3DQ7Z6J8 389 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 OOSP2Q86WS3 158 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 LIX1Q8N485 282 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 KIF2BQ8N4N8 673 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ARHGEF39Q8N4T4 335 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 C1orf52Q8N6N3 182 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 FAM181AQ8N9Y4 354 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 PCYOX1LQ8NBM8 494 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 OR8J2Q8NGG1 315 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SAP25Q8TEE9 199 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 STARD8Q92502 1023 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 RSC1A1Q92681 617 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 RCN3Q96D15 328 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 COQ8BQ96D53 544 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MTERF3Q96E29 417 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 APOLD1Q96LR9 279 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ZNF285Q96NJ3 590 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 RAB3IPQ96QF0 476 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 OR2A5Q96R48 311 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 HOPXQ9BPY8 73 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 C1orf50Q9BV19 199 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MRPL1Q9BYD6 325 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 AICDAQ9GZX7 198 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 OR51B5Q9H339 312 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 DDX31Q9H8H2 851 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SYNPO2LQ9H987 977 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MYNNQ9NPC7 610 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 EVA1BQ9NVM1 165 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 HRASLS2Q9NWW9 162 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 UCKL1Q9NWZ5 548 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 AHSPQ9NZD4 102 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 TMEM181Q9P2C4 612 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ABCD2Q9UBJ2 740 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 CD300AQ9UGN4 299 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ATP6V1HQ9UI12 483 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MCM8Q9UJA3 840 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 EXO1Q9UQ84 846 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 NEUROG3Q9Y4Z2 214 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 POLR3HQ9Y535 204 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 PCDHGA7Q9Y5G6 932 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 CACNA1EQ15878 2313 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 WDFY4Q6ZS81 3184 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 TNRC6BQ9UPQ9 1833 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 DMDP11532 3685 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 KNL1Q8NG31 2342 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 ARHGEF17Q96PE2 2063 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 TRBV5-3A0A0A0MS03 114 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 FEZF1A0PJY2 475 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 ISM1B1AKI9 464 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 B4DGG1 531 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PLPP1O14494 284 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 MRASO14807 208 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 AIM2O14862 343 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 CFLARO15519 480 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 OR1F1O43749 312 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 MGRN1O60291 552 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PCDHGA12O60330 932 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 CTSVO60911 334 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 MYO1DO94832 1006 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 UBXN7O94888 489 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 TGFB1P01137 390 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 LMNAP02545 664 aaKnown RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PCNAP12004 261 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 GLB1P16278 677 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 POLR2CP19387 275 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 TPP2P29144 1249 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PTPN6P29350 595 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PGM1P36871 562 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 CAPZBP47756 277 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 GABRA4P48169 554 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 ARRB1P49407 418 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 MAZP56270 477 aaKnown RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 WNT3P56703 355 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 KCNK10P57789 538 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PHC1P78364 1004 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 ELF3P78545 371 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 SRSF11Q05519 484 aaKnown RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 BNIP3Q12983 259 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 RIPK1Q13546 671 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 TSTA3Q13630 321 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PLCL1Q15111 1095 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 RBBP5Q15291 538 aaKnown RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 FXNQ16595 210 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 UGT8Q16880 541 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 DEFB133Q30KQ1 61 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 VPS26BQ4G0F5 336 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PIGGQ5H8A4 983 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PAGE3Q5JUK9 113 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 LRIF1Q5T3J3 769 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 FAM71E1Q6IPT2 247 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PRMT9Q6P2P2 845 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 ABHD17CQ6PCB6 329 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 FIGLAQ6QHK4 219 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 FAM20CQ8IXL6 584 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 SLC35F3Q8IY50 421 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 TBC1D19Q8N5T2 526 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 ARL10Q8N8L6 244 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms