RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 H0YIG0 161 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ZFAND5O76080 213 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 CLDN1O95832 211 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 SP9P0CG40 484 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 GATA1P15976 413 aaPredicted RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 RPL35AP18077 110 aaKnown RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ITIH1P19827 911 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 PIK3R1P27986 724 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 RBMS1P29558 406 aaKnown RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 CETN2P41208 172 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 OR3A2P47893 321 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 NPBWR1P48145 328 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 SNRPD1P62314 119 aaKnown RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 SRSF9Q13242 221 aaKnown RBP eCLIP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 TRA2AQ13595 282 aaKnown RBP eCLIP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 TMEM132DQ14C87 1099 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 CCDC158Q5M9N0 1113 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 FCRLAQ7L513 359 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 C5orf24Q7Z6I8 188 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 PHLDB2Q86SQ0 1253 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 PRUNE1Q86TP1 453 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 IQCA1Q86XH1 822 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 TUSC5Q8IXB3 177 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 TDHQ8IZJ6 230 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 LSMEM2Q8N112 164 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 GPC2Q8N158 579 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 FAM89BQ8N5H3 189 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 PTP4A1Q93096 173 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 CENPTQ96BT3 561 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 MOCOSQ96EN8 888 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ZNF486Q96H40 463 aaPredicted RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ZNF414Q96IQ9 312 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 FAM218AQ96MZ4 157 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 TSSK2Q96PF2 358 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 NEDD4LQ96PU5 975 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ALKBH7Q9BT30 221 aaPredicted RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 SYT11Q9BT88 431 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 FUT8Q9BYC5 575 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 DNAI2Q9GZS0 605 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ZNF350Q9GZX5 532 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 FAM49AQ9H0Q0 323 aaPredicted RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 UBQLN3Q9H347 655 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 C5orf66Q9H5L9 145 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 SRD5A3Q9H8P0 318 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 PLCXD1Q9NUJ7 323 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ABCB8Q9NUT2 735 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 TBC1D13Q9NVG8 400 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 DNAJC17Q9NVM6 304 aaKnown RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ARGLU1Q9NWB6 273 aaPredicted RBP3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 BARHL2Q9NY43 387 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 IL36AQ9UHA7 158 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 PILRBQ9UKJ0 227 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 PRDM4Q9UKN5 801 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 AGTPBP1Q9UPW5 1226 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 NSG2Q9Y328 171 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ZHX2Q9Y6X8 837 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 ZNF318Q5VUA4 2279 aa3.04□□□□□ -1.92
TMEM50B-208ENST00000474272 MYH14Q7Z406 1995 aaKnown RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 TCOF1Q13428 1488 aaKnown RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 PTPRKQ15262 1439 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 SPATA31E1Q6ZUB1 1445 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 PDS5BQ9NTI5 1447 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 INSRP06213 1382 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 ANKRD30BQ9BXX2 1392 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 TRAV18A0A075B6X5 111 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 ILVBLA1L0T0 632 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 NPIPA3F8WFD2 350 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 SLC33A1O00400 549 aaPredicted RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 FMO6PO60774 539 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 YES1P07947 543 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 CYP2A7P20853 494 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 GATA2P23769 480 aaPredicted RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 OPRL1P41146 370 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 IER3P46695 156 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 PAX9P55771 341 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 XGP55808 180 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 DCDC1P59894 354 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 ST8SIA6P61647 398 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 ASIC1P78348 528 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 EFTUD2Q15029 972 aaKnown RBP eCLIP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 PTPN14Q15678 1187 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 SNAI3Q3KNW1 292 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 Q6ZRP5 223 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 HOGA1Q86XE5 327 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 SIAH3Q8IW03 269 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 AQP12AQ8IXF9 295 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 NUP93Q8N1F7 819 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 GBP7Q8N8V2 638 aaPredicted RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 KIAA0895Q8NCT3 520 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 MRGPRDQ8TDS7 321 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 SNRNP40Q96DI7 357 aaKnown RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 PKNOX2Q96KN3 472 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 C2orf48Q96LS8 159 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 HNRNPABQ99729 332 aaKnown RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 NKX3-1Q99801 234 aaPredicted RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 TDRD1Q9BXT4 1180 aaKnown RBP3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 SLC39A8Q9C0K1 460 aa3.03□□□□□ -1.92
TMEM50B-208ENST00000474272 MMADHCQ9H3L0 296 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms