RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 DNAJC19Q96DA6 116 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PDCD1LG2Q9BQ51 273 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 Q9N2J8 555 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TLR9Q9NR96 1032 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NUDT15Q9NV35 164 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 EDARQ9UNE0 448 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 APOL3O95236 402 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DLDP09622 509 aaKnown RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RBM34P42696 430 aaKnown RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DMWDQ09019 674 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TSTD2Q5T7W7 516 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NIPAL3Q6P499 406 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KLHL36Q8N4N3 616 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TTLQ8NG68 377 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PRR11Q96HE9 360 aaPredicted RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MEGF6O75095 1541 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CILPO75339 1184 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 POP7O75817 140 aaKnown RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PAK4O96013 591 aaPredicted RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SPARCP09486 303 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCNFP41002 786 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NUDT6P53370 316 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GNG2P59768 71 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C1orf61Q13536 156 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GALNT10Q86SR1 603 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF100Q8IYN0 542 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MKL1Q969V6 931 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CYB5BO43169 146 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TRMUO75648 421 aaKnown RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 EOMESO95936 686 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RHBDL3P58872 404 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NT5DC1Q5TFE4 455 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TRIM74Q86UV6 250 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC44A1Q8WWI5 657 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CADM1Q9BY67 442 aaKnown RBP12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TNFRSF10DQ9UBN6 386 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SH2B3Q9UQQ2 575 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PDE10AQ9Y233 779 aa12.85□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TVP23AA6NH52 213 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SEC14L5O43304 696 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 COL6A2P12110 1019 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NUDT13Q86X67 352 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SAMD14Q8IZD0 417 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DTX3Q8N9I9 347 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MAPK15Q8TD08 544 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SCGB3A2Q96PL1 93 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHB10Q9UN67 800 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF451Q9Y4E5 1061 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GKP32189 559 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IL10RBQ08334 325 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PAQR3Q6TCH7 311 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MBOAT1Q6ZNC8 495 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BBS1Q8NFJ9 593 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ALG3Q92685 438 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BORCS5Q969J3 196 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KLHDC7BQ96G42 594 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ANKRA2Q9H9E1 313 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 S100A14Q9HCY8 104 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHB14Q9Y5E9 798 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GLTPD2A6NH11 291 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FLRT2O43155 660 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ENGP17813 658 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NDST2P52849 883 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF267Q14586 743 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC39A4Q6P5W5 647 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IGFN1Q86VF2 1251 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OR8K5Q8NH50 307 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C22orf15Q8WYQ4 148 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BPIFA2Q96DR5 249 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C1orf21Q9H246 121 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 XKR8Q9H6D3 395 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHGA10Q9Y5H3 936 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 INPPL1O15357 1258 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LILRB5O75023 590 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FNTBP49356 437 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BCL2A1Q16548 175 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 UGT8Q16880 541 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 STEAP3Q658P3 488 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NFKBIDQ8NI38 313 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CD180Q99467 661 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FBRSQ9HAH7 460 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HRASLS2Q9NWW9 162 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 STK17BO94768 372 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FARS2O95363 451 aaKnown RBP12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GSTT2P0CG29 244 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SYT16Q17RD7 645 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TIGD5Q53EQ6 642 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HACD2Q6Y1H2 254 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms