RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 ROBO4Q8WZ75 1007 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 NSUN4Q96CB9 384 aaKnown RBP1.41□□□□□ -2.18
COMMD3-209ENST00000471350 LURAP1Q96LR2 239 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 RUNDC3BQ96NL0 473 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 NEDD4LQ96PU5 975 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 MAPKAP1Q9BPZ7 522 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 SDF4Q9BRK5 362 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 SNX25Q9H3E2 840 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 CNOT10Q9H9A5 744 aaKnown RBP1.41□□□□□ -2.18
COMMD3-209ENST00000471350 XAB2Q9HCS7 855 aaKnown RBP1.41□□□□□ -2.18
COMMD3-209ENST00000471350 IL1RAPQ9NPH3 570 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 DEPPQ9NTK1 212 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 OLAHQ9NV23 265 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 THYN1Q9P016 225 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 ZNF69Q9UC07 566 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 CPQQ9Y646 472 aa1.41□□□□□ -2.18
COMMD3-209ENST00000471350 hCG_1809904A0A1W2PP81 198 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 A0A1W2PPE2 198 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 A0A1W2PPK0 400 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 A0A1W2PQ72 361 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 A0A1W2PR64 198 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 C17orf105B2RV13 164 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 K7EQG2 157 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 RTCAO00442 366 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 TNFSF11O14788 317 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 AP5Z1O43299 807 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 LUC7L3O95232 432 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 APBB3O95704 486 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 BAG3O95817 575 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 SERPING1P05155 500 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 STAG3L1P0CL83 205 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 CTNNA2P26232 953 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 CSE1LP55060 971 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 CLDN15P56746 228 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 CLDN17P56750 224 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 RIPK4P57078 832 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 POLR2LP62875 67 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 RALGDSQ12967 914 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 STK4Q13043 487 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 CUL4AQ13619 759 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 FASTKQ14296 549 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 KNOP1Q1ED39 458 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 VWC2Q2TAL6 325 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 LETM2Q2VYF4 491 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 POM121L1PQ3SYA9 428 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 SLC22A6Q4U2R8 563 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 SPANXN4Q5MJ08 99 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 WDR78Q5VTH9 848 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 REP15Q6BDI9 236 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 TTC27Q6P3X3 843 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 NHLRC1Q6VVB1 395 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 PP632Q6XCG6 107 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 LINC00346Q8IVM7 164 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 MFN1Q8IWA4 741 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 SLC4A11Q8NBS3 891 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 PYCR2Q96C36 320 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 OTUB1Q96FW1 271 aaPredicted RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 PPP1R16AQ96I34 528 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 CFAP57Q96MR6 1250 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 ALKBH3Q96Q83 286 aaPredicted RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 NAP1L4Q99733 375 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 CHCHD6Q9BRQ6 235 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 PI4K2AQ9BTU6 479 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 NACAP1Q9BZK3 213 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 TRIM7Q9C029 511 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 GHITMQ9H3K2 345 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 RPF1Q9H9Y2 349 aaKnown RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 ZNF275Q9NSD4 429 aaPredicted RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 IL17CQ9P0M4 197 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 RSPH14Q9UHP6 348 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 RSF1Q96T23 1441 aaPredicted RBP1.4□□□□□ -2.19
COMMD3-209ENST00000471350 NEDD4P46934 1319 aa1.4□□□□□ -2.19
COMMD3-209ENST00000471350 IGKV6-21A0A0C4DH24 114 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 ANKRD18BA2A2Z9 1011 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 IGLON5A6NGN9 336 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 CCL24O00175 119 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 SIGLEC5O15389 551 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 CREB3O43889 395 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 SRPX2O60687 465 aaPredicted RBP1.39□□□□□ -2.19
COMMD3-209ENST00000471350 RHBDL1O75783 438 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 PENKP01210 267 aaPredicted RBP1.39□□□□□ -2.19
COMMD3-209ENST00000471350 PIGRP01833 764 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 SELEP16581 610 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 ZNF32P17041 273 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 GOT1P17174 413 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 LIMK1P53667 647 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 GEMIN4P57678 1058 aaKnown RBP1.39□□□□□ -2.19
COMMD3-209ENST00000471350 ERVPABLB-1P60509 514 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 PRKCEQ02156 737 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 CYLC2Q14093 348 aaPredicted RBP1.39□□□□□ -2.19
COMMD3-209ENST00000471350 CRMP1Q14194 572 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 GRB14Q14449 540 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 PTGISQ16647 500 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 ARMC4Q5T2S8 1044 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 ITPRIPL1Q6GPH6 555 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 ARMCX5Q6P1M9 558 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 ENPP7Q6UWV6 458 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 PAMR1Q6UXH9 720 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 Q6ZVQ6 151 aa1.39□□□□□ -2.19
COMMD3-209ENST00000471350 Q71RC1 249 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms