RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 NIPAL1Q6NVV3 410 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 KIRREL2Q6UWL6 708 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 TIFABQ6ZNK6 161 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 ABHD13Q7L211 337 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 CNPY4Q8N129 248 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 CLEC1AQ8NC01 280 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 OR11G2Q8NGC1 345 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 OR51Q1Q8NH59 317 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 UTP15Q8TED0 518 aaKnown RBP9.21□□□□□ -0.94
SRRT-208ENST00000469602 VPS50Q96JG6 964 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 CCDC77Q9BR77 488 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 MESP1Q9BRJ9 268 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 EFCAB11Q9BUY7 163 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 SLC25A23Q9BV35 468 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 MLXIPLQ9NP71 852 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 ZNF358Q9NW07 568 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 HCN3Q9P1Z3 774 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 CPSF2Q9P2I0 782 aaKnown RBP9.21□□□□□ -0.94
SRRT-208ENST00000469602 MKL2Q9ULH7 1088 aa9.21□□□□□ -0.94
SRRT-208ENST00000469602 G3BP2Q9UN86 482 aaKnown RBP9.21□□□□□ -0.94
SRRT-208ENST00000469602 IQANK1A0A1B0GTG1 560 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 LRIT2A6NDA9 550 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 URADA6NGE7 173 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 ZNF860A6NHJ4 632 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 A6NL46 340 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 PCDH17O14917 1159 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 JRKO75564 520 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 CLEC3AO75596 197 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 SLU7O95391 586 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 BMP10O95393 424 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 HEXBP07686 556 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 ACPPP15309 386 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 EPB42P16452 691 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 NR1D1P20393 614 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 IL10P22301 178 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 HNF4AP41235 474 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 SOX8P57073 446 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 RAB8AP61006 207 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 STXBP1P61764 594 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 AIMP2Q13155 320 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 CHIT1Q13231 466 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 LAPTM5Q13571 262 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 PCBP2Q15366 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
SRRT-208ENST00000469602 HIST2H2ACQ16777 129 aaPredicted RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 TUBB8Q3ZCM7 444 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 TOR1AIP1Q5JTV8 583 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 HIST2H2AA3Q6FI13 130 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 METTL2BQ6P1Q9 378 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 ASB18Q6ZVZ8 466 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 VN1R5Q7Z5H4 357 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 LCA5Q86VQ0 697 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 PTRH1Q86Y79 214 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 GALNT16Q8N428 558 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 TEX9Q8N6V9 391 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 FDCSPQ8NFU4 85 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 OR5T3Q8NGG3 340 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 UBLCP1Q8WVY7 318 aaPredicted RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 UBE2E3Q969T4 207 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 SCYL1Q96KG9 808 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 MRPL57Q9BQC6 102 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 NUDT9Q9BW91 350 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 AICDAQ9GZX7 198 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 MRPL46Q9H2W6 279 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 RHBGQ9H310 441 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 KLHL31Q9H511 634 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 ATP13A2Q9NQ11 1180 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 GPR83Q9NYM4 423 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 PSMC3IPQ9P2W1 217 aaPredicted RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 XPR1Q9UBH6 696 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 ZNF490Q9ULM2 529 aaPredicted RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 TMCO1Q9UM00 188 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 ANGPTL3Q9Y5C1 460 aa9.2□□□□□ -0.94
SRRT-208ENST00000469602 TNPO3Q9Y5L0 923 aaKnown RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 HEMK1Q9Y5R4 338 aaPredicted RBP9.2□□□□□ -0.94
SRRT-208ENST00000469602 A0A1W2PQ72 361 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 ANKDD1BA6NHY2 528 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 LRRC14BA6NHZ5 514 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 C4orf51C9J302 202 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 MASP2O00187 686 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 E2F3O00716 465 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 SUV39H1O43463 412 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 SMIM24O75264 130 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 ALOX12BO75342 701 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 SIX3O95343 332 aaPredicted RBP9.19□□□□□ -0.94
SRRT-208ENST00000469602 TBX6O95947 436 aaPredicted RBP9.19□□□□□ -0.94
SRRT-208ENST00000469602 B3GALT4O96024 378 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 HPP00738 406 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 PDGFAP04085 211 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 SHBGP04278 402 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 CYC1P08574 325 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 C8orf89P0DMQ9 161 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 SMIM10L1P0DMW3 83 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 COX6A1P12074 109 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 HNRNPH1P31943 449 aaKnown RBP9.19□□□□□ -0.94
SRRT-208ENST00000469602 HPDP32754 393 aaPredicted RBP9.19□□□□□ -0.94
SRRT-208ENST00000469602 PIK3CGP48736 1102 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 EFNA3P52797 238 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 VSNL1P62760 191 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 RAPSNQ13702 412 aa9.19□□□□□ -0.94
SRRT-208ENST00000469602 MYBPC3Q14896 1274 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms