RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 OR4N4Q8N0Y3 316 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SLC35F6Q8N357 371 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 TRAM1L1Q8N609 369 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 EID2Q8N6I1 236 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 BBOF1Q8ND07 529 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 DEFB124Q8NES8 71 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SPATA22Q8NHS9 363 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 ARRDC2Q8TBH0 407 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 C1orf54Q8WWF1 131 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 TBC1D20Q96BZ9 403 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.43
PTCD3-208ENST00000469585 ZNF514Q96K75 400 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-208ENST00000469585 LYSMD1Q96S90 227 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 FAM118BQ9BPY3 351 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 DPEP2Q9H4A9 486 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SYNDIG1Q9H7V2 258 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 VPS18Q9P253 973 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SEMA5BQ9P283 1151 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 ASIC3Q9UHC3 531 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 CD84Q9UIB8 345 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 NFU1Q9UMS0 254 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 SNX12Q9UMY4 172 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 GPR34Q9UPC5 381 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 PIEZO1Q92508 2521 aa6.09□□□□□ -1.43
PTCD3-208ENST00000469585 PABPN1LA6NDY0 278 aaKnown RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 OR5K4A6NMS3 321 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 LMO7DNF2Z398 122 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TMX2-CTNND1H3BSU7 103 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 CCDC188H7C350 402 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 CDX4O14627 284 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 KMOO15229 486 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 INPP4BO15327 924 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 AP2A1O95782 977 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 MT-CO3P00414 261 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 DHRS4L1P0CG22 281 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 CKMT2P17540 419 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 GALNSP34059 522 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 FNTAP49354 379 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 RAE1P78406 368 aaKnown RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 SEMG2Q02383 582 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 NIPAL4Q0D2K0 466 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TUBB2AQ13885 445 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TIGD6Q17RP2 521 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 DNAJC21Q5F1R6 531 aaKnown RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 ZRANB3Q5FWF4 1079 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 ARMC3Q5W041 872 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 CCDC137Q6PK04 289 aaKnown RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TAS2R42Q7RTR8 314 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 MAATS1Q7Z4T9 603 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 HSD11B1LQ7Z5J1 315 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 SDCCAG8Q86SQ7 713 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TSPAN33Q86UF1 283 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 HOOK3Q86VS8 718 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TRAPPC5Q8IUR0 188 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 ARL10Q8N8L6 244 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 MNS1Q8NEH6 495 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 ZNF548Q8NEK5 533 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 OR4C6Q8NH72 309 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 ACTRT1Q8TDG2 376 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 NPIPB3Q92617 1050 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 SH3KBP1Q96B97 665 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 CAPZA3Q96KX2 299 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 OR2M4Q96R27 311 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TUBB2BQ9BVA1 445 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 RIOK2Q9BVS4 552 aaKnown RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 STRADBQ9C0K7 418 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 OSGEPL1Q9H4B0 414 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 ANGPTL2Q9UKU9 493 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 TTC7AQ9ULT0 858 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 CA5BQ9Y2D0 317 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 GPR52Q9Y2T5 361 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 UBE2J1Q9Y385 318 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-208ENST00000469585 PCDHGA1Q9Y5H4 931 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 DGKBQ9Y6T7 804 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 PI4KAP42356 2102 aa6.08□□□□□ -1.44
PTCD3-208ENST00000469585 ANKRD36A6QL64 1941 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 RIF1Q5UIP0 2472 aaKnown RBP6.07□□□□□ -1.44
PTCD3-208ENST00000469585 LOC285095A0A1B0GVY8 99 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 CPED1A4D0V7 1026 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 B4DGG1 531 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 RAD51BO15315 384 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 KCNJ13O60928 360 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 GJB3O75712 270 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 FAM155BO75949 473 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 CDK14O94921 469 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 AGTP01019 485 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 KRT14P02533 472 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 WNT1P04628 370 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 ATP1A1P05023 1023 aaKnown RBP6.07□□□□□ -1.44
PTCD3-208ENST00000469585 GP1BAP07359 652 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 IVLP07476 585 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 PIRTP0C851 137 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 LHCGRP22888 699 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 TRIM23P36406 574 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 ACTR1BP42025 376 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 NPY2RP49146 381 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 VPS41P49754 854 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 ACTR1AP61163 376 aa6.07□□□□□ -1.44
PTCD3-208ENST00000469585 RALGDSQ12967 914 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms