RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF780AO75290 641 aaPredicted RBP11.91□□□□□ -0.5
USP11-206ENST00000469080 NDUFS6O75380 124 aaKnown RBP11.91□□□□□ -0.5
USP11-206ENST00000469080 EPOP01588 193 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 PPM1AP35813 382 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 EIF2DP41214 584 aaKnown RBP11.91□□□□□ -0.5
USP11-206ENST00000469080 PSMD8P48556 350 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 DAB2P98082 770 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 DGCR6Q14129 220 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 CCSMST1Q4G0I0 132 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 CCNYL2Q5T2Q4 361 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ADNP2Q6IQ32 1131 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 UNC5DQ6UXZ4 953 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 SNX20Q7Z614 316 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 RHOXF1Q8NHV9 184 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 UBASH3BQ8TF42 649 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 C2orf15Q8WU43 125 aaKnown RBP11.91□□□□□ -0.5
USP11-206ENST00000469080 PIH1D2Q8WWB5 315 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 IRF7Q92985 503 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ST6GAL2Q96JF0 529 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ZNF599Q96NL3 588 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 INTS10Q9NVR2 710 aaKnown RBP11.91□□□□□ -0.5
USP11-206ENST00000469080 CCDC59Q9P031 241 aaKnown RBP11.91□□□□□ -0.5
USP11-206ENST00000469080 PCTPQ9UKL6 214 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 INVSQ9Y283 1065 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ZDBF2Q9HCK1 2354 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 CCDC182A6NF36 153 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 TSPAN6O43657 245 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 SULT1B1O43704 296 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 CACNG3O60359 315 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ABLIM3O94929 683 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 MLYCDO95822 493 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 RETP07949 1114 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ZDHHC11BP0C7U3 371 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ERVK-21P61565 698 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 ALDH6A1Q02252 535 aaKnown RBP11.91□□□□□ -0.5
USP11-206ENST00000469080 CACHD1Q5VU97 1274 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 GLYATQ6IB77 296 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 MCOLN3Q8TDD5 553 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 DERL2Q9GZP9 239 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 FNIP2Q9P278 1114 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 AASSQ9UDR5 926 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 OAZ3Q9UMX2 235 aa11.91□□□□□ -0.5
USP11-206ENST00000469080 AKR7A2O43488 359 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 FCER2P06734 321 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 CEBPBP17676 345 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
USP11-206ENST00000469080 DGKGP49619 791 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 GSK3BP49841 420 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 ARHGDIBP52566 201 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 AP1S1P61966 158 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 UBE3AQ05086 875 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 BTBD16Q32M84 506 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 CARD16Q5EG05 197 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 SPESP1Q6UW49 350 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 GDPD4Q6W3E5 623 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 HSD11B1LQ7Z5J1 315 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 SYT12Q8IV01 421 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 YAF2Q8IY57 180 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 NXPE1Q8N323 547 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 FAM120BQ96EK7 910 aaKnown RBP11.9□□□□□ -0.5
USP11-206ENST00000469080 OTUB1Q96FW1 271 aaPredicted RBP11.9□□□□□ -0.5
USP11-206ENST00000469080 RBM14Q96PK6 669 aaKnown RBP11.9□□□□□ -0.5
USP11-206ENST00000469080 TRIB3Q96RU7 358 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 MRM3Q9HC36 420 aaKnown RBP11.9□□□□□ -0.5
USP11-206ENST00000469080 STMND1H3BQB6 276 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 BTN3A3O00478 584 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 OTCP00480 354 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 UROSP10746 265 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 PDHA2P29803 388 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 CCR7P32248 378 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 HSD17B2P37059 387 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 OR4D2P58180 307 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 NFKB2Q00653 900 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 ALG1LQ6GMV1 187 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 LARP4Q71RC2 724 aaKnown RBP eCLIP11.9□□□□□ -0.58e-8■□□□□ 9.7
USP11-206ENST00000469080 OR8H3Q8N146 312 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 DOK4Q8TEW6 326 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 HHIPL1Q96JK4 782 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 PITHD1Q9GZP4 211 aaPredicted RBP11.9□□□□□ -0.5
USP11-206ENST00000469080 TAS2R9Q9NYW1 312 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 NUFIP1Q9UHK0 495 aaKnown RBP11.9□□□□□ -0.5
USP11-206ENST00000469080 TMPRSS11EQ9UL52 423 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
USP11-206ENST00000469080 NDUFA2O43678 99 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 UGT2B11O75310 529 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 POP4O95707 220 aaKnown RBP11.9□□□□□ -0.51
USP11-206ENST00000469080 PTTG1O95997 202 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 TGFB1P01137 390 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 POU3F3P20264 500 aaPredicted RBP11.9□□□□□ -0.51
USP11-206ENST00000469080 TIAL1Q01085 375 aaKnown RBP eCLIP11.9□□□□□ -0.51
USP11-206ENST00000469080 METTL11BQ5VVY1 283 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 RGL4Q8IZJ4 473 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 PGBD3Q8N328 593 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 HMGCLL1Q8TB92 370 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 ADAMTS19Q8TE59 1207 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 ITCHQ96J02 903 aa11.9□□□□□ -0.51
USP11-206ENST00000469080 TTLL2Q9BWV7 592 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms