RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 RERGQ96A58 199 aaPredicted RBP16.69■□□□□ 0.26
RPL39-202ENST00000468844 METTL2AQ96IZ6 378 aaKnown RBP16.69■□□□□ 0.26
RPL39-202ENST00000468844 SLC41A2Q96JW4 573 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 ZNF768Q9H5H4 540 aaKnown RBP16.69■□□□□ 0.26
RPL39-202ENST00000468844 NMRK1Q9NWW6 199 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 DLGAP4Q9Y2H0 992 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 TMED5Q9Y3A6 229 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 CCDC22O60826 627 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 SEMA3DO95025 777 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 VSX2P58304 361 aaPredicted RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 SNRPNP63162 240 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 RAE1P78406 368 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 PWP1Q13610 501 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 ZC3H12BQ5HYM0 836 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 IL23RQ5VWK5 629 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 TRPM8Q7Z2W7 1104 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 ARHGAP22Q7Z5H3 698 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 SPATA19Q7Z5L4 167 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 METTL4Q8N3J2 472 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 KLHL6Q8WZ60 621 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 MS4A6EQ96DS6 147 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 FCRL1Q96LA6 429 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 DPYSL5Q9BPU6 564 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 LHX9Q9NQ69 397 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 AIG1Q9NVV5 245 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 NOP53Q9NZM5 478 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 RTCAO00442 366 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 EIF2S1P05198 315 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 ANKRD34CP0C6C1 535 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 G6PDP11413 515 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 NELFEP18615 380 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 SPIDRQ14159 915 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 PTGR1Q14914 329 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 CLPPQ16740 277 aaPredicted RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 NOXRED1Q6NXP6 359 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 GALNT18Q6P9A2 607 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 COMMD6Q7Z4G1 85 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 UBE3DQ7Z6J8 389 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 PIP4P1Q86T03 277 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 KMT5CQ86Y97 462 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 SLITRK4Q8IW52 837 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 D2HGDHQ8N465 521 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 NT5CQ8TCD5 201 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 CCDC106Q9BWC9 280 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 SORBS1Q9BX66 1292 aaKnown RBP16.68■□□□□ 0.26
RPL39-202ENST00000468844 EBPLQ9BY08 206 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 BRINP2Q9C0B6 783 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 ASIC5Q9NY37 505 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 GPR45Q9Y5Y3 372 aa16.68■□□□□ 0.26
RPL39-202ENST00000468844 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.67■□□□□ 0.26
RPL39-202ENST00000468844 BCKDHAP12694 445 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 IDO1P14902 403 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 TACR1P25103 407 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 PDX1P52945 283 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 MCATQ8IVS2 390 aaKnown RBP16.67■□□□□ 0.26
RPL39-202ENST00000468844 CPSF7Q8N684 471 aaKnown RBP16.67■□□□□ 0.26
RPL39-202ENST00000468844 CAMKVQ8NCB2 501 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 WDR48Q8TAF3 677 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 SLC45A3Q96JT2 553 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 CCDC74BQ96LY2 380 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 CDC6Q99741 560 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 C17orf62Q9BQA9 187 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 STARD5Q9NSY2 213 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 SIRT5Q9NXA8 310 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 TOR4AQ9NXH8 423 aa16.67■□□□□ 0.26
RPL39-202ENST00000468844 RUVBL1Q9Y265 456 aaKnown RBP16.67■□□□□ 0.26
RPL39-202ENST00000468844 A0A0G2JN53 185 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 ERI3O43414 337 aaKnown RBP16.66■□□□□ 0.26
RPL39-202ENST00000468844 SRPX2O60687 465 aaPredicted RBP16.66■□□□□ 0.26
RPL39-202ENST00000468844 GBAP04062 536 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 CD1EP15812 388 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 SDC1P18827 310 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 TIA1P31483 386 aaKnown RBP eCLIP16.66■□□□□ 0.263e-41■■■□□ 19.2
RPL39-202ENST00000468844 BSGP35613 385 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 PLA2G16P53816 162 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 RGS1Q08116 209 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 COL9A2Q14055 689 aaPredicted RBP16.66■□□□□ 0.26
RPL39-202ENST00000468844 GSTA3Q16772 222 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 TOR1AIP1Q5JTV8 583 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 B3GNT8Q7Z7M8 397 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 TREML1Q86YW5 311 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 LIX1Q8N485 282 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 CSNK1A1LQ8N752 337 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 OR2L5Q8NG80 312 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 OR9I1Q8NGQ6 314 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 RGMAQ96B86 450 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 ZNF285Q96NJ3 590 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 CENPKQ9BS16 269 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 ACTL8Q9H568 366 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 SDR39U1Q9NRG7 319 aaPredicted RBP16.66■□□□□ 0.26
RPL39-202ENST00000468844 PLCL2Q9UPR0 1127 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 EIF3LQ9Y262 564 aaKnown RBP16.66■□□□□ 0.26
RPL39-202ENST00000468844 PTPRBP23467 1997 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 MAP3K7O43318 606 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 ACPPP15309 386 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 ARL4DP49703 201 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 RAP1GDS1P52306 607 aa16.66■□□□□ 0.26
RPL39-202ENST00000468844 NME5P56597 212 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms