RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 C3AR1Q16581 482 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 HP1BP3Q5SSJ5 553 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-207ENST00000467819 HECTD2Q5U5R9 776 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 RPTNQ6XPR3 784 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 BNC2Q6ZN30 1099 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-207ENST00000467819 CYP4X1Q8N118 509 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 KIF2BQ8N4N8 673 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 TBC1D19Q8N5T2 526 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 TMEM178AQ8NBL3 297 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 NEIL2Q969S2 332 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 FBXL8Q96CD0 374 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 CFAP36Q96G28 342 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 SCMH1Q96GD3 660 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 MAGED4Q96JG8 741 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 NAT9Q9BTE0 207 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 SARGQ9BW04 601 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 DDX47Q9H0S4 455 aaKnown RBP19.79■□□□□ 0.76
COL9A3-207ENST00000467819 CDCP1Q9H5V8 836 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 RUBCNLQ9H714 662 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 FBN2P35556 2912 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 NDC80O14777 642 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 SNRPB2P08579 225 aaKnown RBP19.78■□□□□ 0.76
COL9A3-207ENST00000467819 JAK1P23458 1154 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 HTR1EP28566 365 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 SKP1P63208 163 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 CSHL1Q14406 222 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 TEDDM1Q5T9Z0 273 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 GALNTL5Q7Z4T8 443 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 SLC5A11Q8WWX8 675 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 ATL1Q8WXF7 558 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 GPR137Q96N19 417 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 FRMD6Q96NE9 622 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 OLFM1Q99784 485 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 PLAC1Q9HBJ0 212 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 IKZF3Q9UKT9 509 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 CHMP2BQ9UQN3 213 aa19.78■□□□□ 0.76
COL9A3-207ENST00000467819 NPIPA5E9PKD4 350 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 MLYCDO95822 493 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 ESRRAP11474 423 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-207ENST00000467819 HNF4AP41235 474 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 SCTRP47872 440 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 ADORA2A-AS1P86434 159 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 FAM45BPQ6NSW5 357 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 TRMT10BQ6PF06 316 aaKnown RBP19.77■□□□□ 0.76
COL9A3-207ENST00000467819 ABHD13Q7L211 337 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 GALNT7Q86SF2 657 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 HORMAD2Q8N7B1 307 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 NT5CQ8TCD5 201 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 FAM45AQ8TCE6 357 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 PWWP2AQ96N64 755 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 PTCHD1Q96NR3 888 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 LRFN1Q9P244 771 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 ZFP69BQ9UJL9 534 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 SNX12Q9UMY4 172 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 NPIPA1Q9UND3 350 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 VWA7Q9Y334 891 aa19.77■□□□□ 0.76
COL9A3-207ENST00000467819 CTAGE15A4D2H0 777 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 ASPDHA6ND91 283 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 NEURL1O76050 574 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 SP1P08047 785 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 ENO2P09104 434 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 ELK3P41970 407 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 RAB8AP61006 207 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 BTG2P78543 158 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 REEP5Q00765 189 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 MAPKAPK3Q16644 382 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 ZNF468Q5VIY5 522 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 SLC25A25Q6KCM7 469 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 NIPAL1Q6NVV3 410 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 TMPRSS11BQ86T26 416 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 CTAGE6Q86UF2 777 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 RPS19BP1Q86WX3 136 aaKnown RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 FAM98AQ8NCA5 519 aaKnown RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 ELP5Q8TE02 316 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 UTP15Q8TED0 518 aaKnown RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 THAP3Q8WTV1 239 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 RHBGQ9H310 441 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 CORO1CQ9ULV4 474 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-207ENST00000467819 DYRK1BQ9Y463 629 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 CSMD2Q7Z408 3487 aa19.76■□□□□ 0.75
COL9A3-207ENST00000467819 DCHS2Q6V1P9 2916 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 OTOGQ6ZRI0 2925 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 PRMT3O60678 531 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 MAOAP21397 527 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 SAT1P21673 171 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 TPP2P29144 1249 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-207ENST00000467819 AHRP35869 848 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 ZNF630Q2M218 657 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-207ENST00000467819 KRTCAP3Q53RY4 240 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 SBSNQ6UWP8 590 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 QSOX2Q6ZRP7 698 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 STRA8Q7Z7C7 330 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 THOC6Q86W42 341 aaKnown RBP19.75■□□□□ 0.75
COL9A3-207ENST00000467819 SPPL2CQ8IUH8 684 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 LGI4Q8N135 537 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 ANKRD53Q8N9V6 530 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 CHST11Q9NPF2 352 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 ZNF835Q9Y2P0 537 aa19.75■□□□□ 0.75
COL9A3-207ENST00000467819 PDZD2O15018 2839 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms