RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 GDF5P43026 501 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 IDH3AP50213 366 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 TBPL1P62380 186 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 PRKG2Q13237 762 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 KCNAB2Q13303 367 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 GPR19Q15760 415 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 HIST2H2ACQ16777 129 aaPredicted RBP11.53□□□□□ -0.56
CTNS-205ENST00000467663 PRAMEF13Q5VWM6 474 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 HIST2H2AA3Q6FI13 130 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 GRHL2Q6ISB3 625 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 ZNF517Q6ZMY9 492 aaPredicted RBP11.53□□□□□ -0.56
CTNS-205ENST00000467663 MBOAT1Q6ZNC8 495 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 ATG14Q6ZNE5 492 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 TRPM8Q7Z2W7 1104 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 YTHDF3Q7Z739 585 aaKnown RBP11.53□□□□□ -0.56
CTNS-205ENST00000467663 SYVN1Q86TM6 617 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 TWIST2Q8WVJ9 160 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 APOBEC4Q8WW27 367 aaKnown RBP11.53□□□□□ -0.56
CTNS-205ENST00000467663 C19orf60Q96EN9 201 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 PTCD3Q96EY7 689 aaKnown RBP11.53□□□□□ -0.56
CTNS-205ENST00000467663 MENTQ9BUN1 341 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 RABEP2Q9H5N1 569 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 XKR8Q9H6D3 395 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 PELI2Q9HAT8 420 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 SOHLH2Q9NX45 425 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 ICKQ9UPZ9 632 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 ASB1Q9Y576 335 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 PCDHB3Q9Y5E6 796 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 DNAJC15Q9Y5T4 150 aa11.53□□□□□ -0.56
CTNS-205ENST00000467663 GSAPA4D1B5 854 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 C2orf74A8MZ97 194 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 NPIPB8E9PQR5 432 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 H0YIV9 168 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 CPNE3O75131 537 aaKnown RBP11.52□□□□□ -0.57
CTNS-205ENST00000467663 ULK1O75385 1050 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 CREG1O75629 220 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 SCRG1O75711 98 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 ST6GAL1P15907 406 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 NPPBP16860 134 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 PHEXP78562 749 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 CHIT1Q13231 466 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 MAD2L1Q13257 205 aaPredicted RBP11.52□□□□□ -0.57
CTNS-205ENST00000467663 DNASE1L3Q13609 305 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 KIR2DS3Q14952 304 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 ZSCAN26Q16670 478 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 ZXDCQ2QGD7 858 aaPredicted RBP11.52□□□□□ -0.57
CTNS-205ENST00000467663 DEFB109BQ30KR1 87 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 C18orf21Q32NC0 220 aaPredicted RBP11.52□□□□□ -0.57
CTNS-205ENST00000467663 CCSMST1Q4G0I0 132 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 ATP1A1-AS1Q5TC04 95 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 THEMIS2Q5TEJ8 643 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 ATG9BQ674R7 924 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 LETMD1Q6P1Q0 360 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 C6orf89Q6UWU4 347 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 C17orf64Q86WR6 236 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 TMEM126BQ8IUX1 230 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 KRT78Q8N1N4 520 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 OR52B6Q8NGF0 335 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 CT55Q8WUE5 264 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 LRFN5Q96NI6 719 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 TRAPPC9Q96Q05 1148 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 NT5DC2Q9H857 520 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 AKIRIN1Q9H9L7 192 aaPredicted RBP11.52□□□□□ -0.57
CTNS-205ENST00000467663 FANCEQ9HB96 536 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 TMEM45AQ9NWC5 275 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 NMRK1Q9NWW6 199 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 ACTR10Q9NZ32 417 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 HEY2Q9UBP5 337 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 ZNF225Q9UK10 706 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 PPT2Q9UMR5 302 aa11.52□□□□□ -0.57
CTNS-205ENST00000467663 PIPSLA2A3N6 862 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 CCT8L1PA6NM43 557 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 RGS14O43566 566 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 SLC28A2O43868 658 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 HNRNPCL1O60812 293 aaKnown RBP11.51□□□□□ -0.57
CTNS-205ENST00000467663 ATP5HO75947 161 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 CAPN1P07384 714 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 FURINP09958 794 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 C1GALT1C1LP0DN25 315 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 TSPAN8P19075 237 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 EPORP19235 508 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 BTKQ06187 659 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 PRDX1Q06830 199 aaKnown RBP11.51□□□□□ -0.57
CTNS-205ENST00000467663 IFT88Q13099 833 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 ERV3-1Q14264 604 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 XKR6Q5GH73 641 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 OGFOD2Q6N063 350 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 FAM199XQ6PEV8 388 aaPredicted RBP11.51□□□□□ -0.57
CTNS-205ENST00000467663 SPESP1Q6UW49 350 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 SLCO4C1Q6ZQN7 724 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 RPS27LQ71UM5 84 aaKnown RBP11.51□□□□□ -0.57
CTNS-205ENST00000467663 TRIM46Q7Z4K8 759 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 SPATA19Q7Z5L4 167 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 FAM9CQ8IZT9 166 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 TBC1D19Q8N5T2 526 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 CDYL2Q8N8U2 506 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 SLC38A9Q8NBW4 561 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 ABHD11Q8NFV4 315 aa11.51□□□□□ -0.57
CTNS-205ENST00000467663 OR1L3Q8NH93 324 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms