RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MMP27Q9H306 513 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 TBC1D17Q9HA65 648 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 CLIC5Q9NZA1 410 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 B3GAT1Q9P2W7 334 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 PTRH2Q9Y3E5 179 aaKnown RBP2.94□□□□□ -1.94
XRN1-206ENST00000467077 TRANK1O15050 2925 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 CHD9Q3L8U1 2897 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 CHD7Q9P2D1 2997 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 LRRC37A2A6NM11 1700 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 IGHV3OR16-10A0A075B7F0 116 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 LOC102723996A0A087X1L8 192 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 GPR75-ASB3A0A0A6YYF3 556 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 A8MV72 311 aaPredicted RBP2.93□□□□□ -1.94
XRN1-206ENST00000467077 PHOX2AO14813 284 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 TSPAN1O60635 241 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 ERAL1O75616 437 aaKnown RBP2.93□□□□□ -1.94
XRN1-206ENST00000467077 DFFBO76075 338 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NXPH2O95156 264 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 BCL10O95999 233 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 IGHV4-31P0DP07 118 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 CYP2B6P20813 491 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 SAT1P21673 171 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NNMTP40261 264 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 HERV-K104P61576 105 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NUCB1Q02818 461 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 GCKRQ14397 625 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 BECN1Q14457 450 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NTRK2Q16620 822 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 C15orf32Q32M92 178 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 ITPRIPL2Q3MIP1 535 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 PHLDA2Q53GA4 152 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 CAVIN4Q5BKX8 364 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 IGSF11Q5DX21 431 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 ELFN2Q5R3F8 820 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 FKBP1CQ5VVH2 108 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 APOBEC3HQ6NTF7 200 aaKnown RBP2.93□□□□□ -1.94
XRN1-206ENST00000467077 KCNMB4Q86W47 210 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 TMEM139Q8IV31 216 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 KIRREL3Q8IZU9 778 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NPEPL1Q8NDH3 523 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 PTPMT1Q8WUK0 201 aaPredicted RBP2.93□□□□□ -1.94
XRN1-206ENST00000467077 PHLDA1Q8WV24 401 aaPredicted RBP2.93□□□□□ -1.94
XRN1-206ENST00000467077 CCDC107Q8WV48 283 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 FAM151AQ8WW52 585 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 BADQ92934 168 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 OLFM1Q99784 485 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 FUCA2Q9BTY2 467 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NUP85Q9BW27 656 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 ATP13A3Q9H7F0 1226 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 FGF21Q9NSA1 209 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NKIRAS2Q9NYR9 191 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 NYAP2Q9P242 653 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.93□□□□□ -1.94
XRN1-206ENST00000467077 CACNG4Q9UBN1 327 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 AGTPBP1Q9UPW5 1226 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 WDR37Q9Y2I8 494 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 TTLL3Q9Y4R7 772 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 USP34Q70CQ2 3546 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 CUL9Q8IWT3 2517 aa2.93□□□□□ -1.94
XRN1-206ENST00000467077 C5orf42Q9H799 3197 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 RPAP1Q9BWH6 1393 aaPredicted RBP2.92□□□□□ -1.94
XRN1-206ENST00000467077 FOCADQ5VW36 1801 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 LOC100509620A0A075B734 347 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 FEZF1A0PJY2 475 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 TMEM221A6NGB7 291 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 ANKRD61A6NGH8 418 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 ADAM20O43506 726 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 CENPBP07199 599 aaPredicted RBP2.92□□□□□ -1.94
XRN1-206ENST00000467077 ADRB2P07550 413 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 OR2T7P0C7T2 308 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 NR2F1P10589 423 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 SLC9A3P48764 834 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 SPP2Q13103 211 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 WDR43Q15061 677 aaKnown RBP eCLIP2.92□□□□□ -1.94
XRN1-206ENST00000467077 E2F5Q15329 346 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 CCL14Q16627 93 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 C15orf59Q2T9L4 293 aaPredicted RBP2.92□□□□□ -1.94
XRN1-206ENST00000467077 SPDYCQ5MJ68 293 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 WLSQ5T9L3 541 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 MFSD4BQ5TF39 518 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 TMEM211Q6ICI0 200 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 G2E3Q7L622 706 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 TMEM173Q86WV6 379 aaPredicted RBP2.92□□□□□ -1.94
XRN1-206ENST00000467077 LACC1Q8IV20 430 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 OR8H2Q8N162 312 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 GUF1Q8N442 669 aaKnown RBP2.92□□□□□ -1.94
XRN1-206ENST00000467077 LSMEM1Q8N8F7 131 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 NIPA2Q8N8Q9 360 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 MCUQ8NE86 351 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 PRPF31Q8WWY3 499 aaKnown RBP2.92□□□□□ -1.94
XRN1-206ENST00000467077 LPGAT1Q92604 370 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 MS4A10Q96PG2 267 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 USP28Q96RU2 1077 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 SLF1Q9BQI6 1058 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 SERINC1Q9NRX5 453 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 GIMAP4Q9NUV9 329 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 SPHK1Q9NYA1 384 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 ANAPC11Q9NYG5 84 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 ERAP1Q9NZ08 941 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 MRPL15Q9P015 296 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms