RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CLSTN2Q9H4D0 955 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 PCDH9Q9HC56 1237 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ZNF304Q9HCX3 659 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 FAM60AQ9NP50 221 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 EURLQ9NYK6 297 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 NFKBIL1Q9UBC1 381 aaPredicted RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 CFAP45Q9UL16 551 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 EIF3LQ9Y262 564 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 MEGF8Q7Z7M0 2845 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 A0A0J9YY10 115 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 HSPB2A8KAH6 182 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ANKRD66B4E2M5 251 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 DVL2O14641 736 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 PSMA7O14818 248 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 BCKDKO14874 412 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 CASKO14936 926 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 PRPF4O43172 522 aaKnown RBP eCLIP5.48□□□□□ -1.53
NCL-208ENST00000466274 KDM1AO60341 852 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 FAM20BO75063 409 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 SLC25A12O75746 678 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 PEX11BO96011 259 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 MT-CYBP00156 380 aaPredicted RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 PFKFB1P16118 471 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 PBLDP30039 288 aaPredicted RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 PPP1R2P41236 205 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 SYKP43405 635 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 OR1D4P47884 311 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 GABRA4P48169 554 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ASCL1P50553 236 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 SESN2P58004 480 aaPredicted RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 EEF1A2Q05639 463 aaKnown RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 CUL4AQ13619 759 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 DPYSQ14117 519 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ELAVL1Q15717 326 aaKnown RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 HSPB2Q16082 182 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 HYAL4Q2M3T9 481 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 GXYLT1Q4G148 440 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ZC3H12BQ5HYM0 836 aaKnown RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 C10orf62Q5T681 223 aaPredicted RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 LIPNQ5VXI9 398 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 NAA35Q5VZE5 725 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ZDHHC20Q5W0Z9 365 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ATL3Q6DD88 541 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 TMEM220Q6QAJ8 160 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 GBP6Q6ZN66 633 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 FAM83HQ6ZRV2 1179 aaPredicted RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 TMTC1Q8IUR5 882 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 LRRC49Q8IUZ0 686 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ATPAF2Q8N5M1 289 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 SLC5A8Q8N695 610 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 GPR26Q8NDV2 337 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 OR5AN1Q8NGI8 311 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 OR2L2Q8NH16 312 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 METTL21AQ8WXB1 218 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 SMIM14Q96QK8 99 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 CCL19Q99731 98 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ATG10Q9H0Y0 220 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 MVB12BQ9H7P6 319 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ZWILCHQ9H900 591 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 NT5MQ9NPB1 228 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 SPTLC3Q9NUV7 552 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 C14orf105Q9NVL8 296 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 ANKRD10Q9NXR5 420 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 KLF13Q9Y2Y9 288 aaPredicted RBP5.48□□□□□ -1.53
NCL-208ENST00000466274 CUBNO60494 3623 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 AKAP6Q13023 2319 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 CACNA1CQ13936 2221 aa5.48□□□□□ -1.53
NCL-208ENST00000466274 LOC102723996A0A087X1L8 192 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 A0A1B0GVL5 298 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 GABRR3A8MPY1 467 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 A8MV72 311 aaPredicted RBP5.47□□□□□ -1.53
NCL-208ENST00000466274 FOXN3O00409 490 aaPredicted RBP5.47□□□□□ -1.53
NCL-208ENST00000466274 CD5LO43866 347 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 PRPSAP2O60256 369 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 NME2P1O60361 137 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 FGFR1OPO95684 399 aaKnown RBP5.47□□□□□ -1.53
NCL-208ENST00000466274 CELA2AP08217 269 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 UGT2B7P16662 529 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 MSH3P20585 1137 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 MMP8P22894 467 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 CMA1P23946 247 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 SHMT2P34897 504 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 CD86P42081 329 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 HCAR3P49019 387 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 MAN2A2P49641 1150 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 TAS2R50P59544 299 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 FASTKQ14296 549 aaKnown RBP5.47□□□□□ -1.53
NCL-208ENST00000466274 ZIC1Q15915 447 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 EXT1Q16394 746 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 TAZQ16635 292 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 EXOC3L4Q17RC7 722 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 BTBD16Q32M84 506 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 RIPPLY2Q5TAB7 128 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 ZNF658Q5TYW1 1059 aaPredicted RBP5.47□□□□□ -1.53
NCL-208ENST00000466274 TAF3Q5VWG9 929 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 PLAG1Q6DJT9 500 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 ACAD10Q6JQN1 1059 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 GJB7Q6PEY0 223 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 C12orf54Q6X4T0 127 aa5.47□□□□□ -1.53
NCL-208ENST00000466274 ELOA2Q8IYF1 753 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms