RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SPAG17Q6Q759 2223 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 OR6C74A6NCV1 312 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 TRIM64CA6NLI5 447 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 CHRM5P08912 532 aaPredicted RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 GIMD1P0DJR0 217 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 C1GALT1C1LP0DN25 315 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 POLR2CP19387 275 aaPredicted RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 MYF6P23409 242 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 DDX39BQ13838 428 aaKnown RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 LIPJQ5W064 366 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 SPRED1Q7Z699 444 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 PLD3Q8IV08 490 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 RAB42Q8N4Z0 105 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 SETD7Q8WTS6 366 aaKnown RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 PPM1MQ96MI6 270 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 IL1RL2Q9HB29 575 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 POT1Q9NUX5 634 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 GPRC5BQ9NZH0 403 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 RSL24D1Q9UHA3 163 aaKnown RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 AURKCQ9UQB9 309 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 CCL27Q9Y4X3 112 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ZFC3H1O60293 1989 aaKnown RBP17.83■□□□□ 0.44
CAPN3-209ENST00000466222 A0A087WXM4 84 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 FEZF1A0PJY2 475 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 FAM234BA2RU67 622 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 SOCS2O14508 198 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 SLC22A3O75751 556 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 HOXB3P14651 431 aaPredicted RBP17.83■□□□□ 0.44
CAPN3-209ENST00000466222 CDH2P19022 906 aaPredicted RBP17.83■□□□□ 0.44
CAPN3-209ENST00000466222 CNR2P34972 360 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 HLA-BQ31612 363 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 GGTA1PQ4G0N0 100 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 C17orf64Q86WR6 236 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 SPPL2CQ8IUH8 684 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 HOMEZQ8IX15 550 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 SELENOMQ8WWX9 145 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 USP7Q93009 1102 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 ACPTQ9BZG2 426 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 ALG2Q9H553 416 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 ELOVL6Q9H5J4 265 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 ERVMER34-1Q9H9K5 563 aa17.83■□□□□ 0.44
CAPN3-209ENST00000466222 CCDC154A6NI56 674 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 OR5K4A6NMS3 321 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 ISM1B1AKI9 464 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 ANXA6P08133 673 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 CKMT2P17540 419 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 TYRP1P17643 537 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 SHMT2P34897 504 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 GSK3BP49841 420 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 CDK9P50750 372 aaKnown RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 CCT8P50990 548 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PPP1CAP62136 330 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PCDH1Q08174 1060 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 SF1Q15637 639 aaKnown RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 FRG2Q64ET8 278 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 ATG9BQ674R7 924 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 GRHL2Q6ISB3 625 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 ARHGAP22Q7Z5H3 698 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 SLC9B2Q86UD5 537 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 TRIM73Q86UV7 250 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PROSER1Q86XN7 944 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 OR7G3Q8NG95 312 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 WDR20Q8TBZ3 569 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 FRG2BQ96QU4 278 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 OR6C2Q9NZP2 312 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 SUSD2Q9UGT4 822 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PLXND1Q9Y4D7 1925 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 MYOCOSA0A1B0GUC4 107 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 TNFRSF10AO00220 468 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 CASC3O15234 703 aaKnown RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 RASAL1O95294 804 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PCNAP12004 261 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 HTR1EP28566 365 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 CASP2P42575 452 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 POLR2JP52435 117 aaKnown RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PRDX1Q06830 199 aaKnown RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 E2F2Q14209 437 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 CAPRIN1Q14444 709 aaKnown RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 FXNQ16595 210 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PEAR1Q5VY43 1037 aaPredicted RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 KIAA1614Q5VZ46 1190 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 TMEM26Q6ZUK4 368 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 FAM129CQ86XR2 697 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 KCTD14Q9BQ13 255 aaPredicted RBP17.82■□□□□ 0.44
CAPN3-209ENST00000466222 C1orf50Q9BV19 199 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 ADI1Q9BV57 179 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 RAB11FIP5Q9BXF6 653 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 SLC29A3Q9BZD2 475 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 KLHL25Q9H0H3 589 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 SLC6A20Q9NP91 592 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PCDHB11Q9Y5F2 797 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 PCDHGA2Q9Y5H1 932 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 LRP4O75096 1905 aa17.82■□□□□ 0.44
CAPN3-209ENST00000466222 GPR179Q6PRD1 2367 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 PIPSLA2A3N6 862 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 SAC3D1A6NKF1 404 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 LSM1O15116 133 aaKnown RBP17.81■□□□□ 0.44
CAPN3-209ENST00000466222 UGDHO60701 494 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 ETHE1O95571 254 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 KRT6AP02538 564 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms