RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SEPHS1P49903 392 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 REEP5Q00765 189 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 INSM1Q01101 510 aaPredicted RBP16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 RELAQ04206 551 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 ZFP36L1Q07352 338 aaKnown RBP16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 LAPTM5Q13571 262 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 COQ5Q5HYK3 327 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 PAGE2BQ5JRK9 111 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 TMIGD1Q6UXZ0 262 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 HPS6Q86YV9 775 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 KLHL6Q8WZ60 621 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 TCTN2Q96GX1 697 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 MAGEB10Q96LZ2 347 aaPredicted RBP16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 SARGQ9BW04 601 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 TRPS1Q9UHF7 1281 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 PILRAQ9UKJ1 303 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 H0YIV9 168 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 FFAR3O14843 346 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 GPR42O15529 346 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 PDE5AO76074 875 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 CEACAM1P13688 526 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 VHLP40337 213 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 TCHHL1Q5QJ38 904 aaPredicted RBP16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 REP15Q6BDI9 236 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 B3GNT8Q7Z7M8 397 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 FUNDC1Q8IVP5 155 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 KRT78Q8N1N4 520 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 OR7G3Q8NG95 312 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 ROPN1LQ96C74 230 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 SLC41A2Q96JW4 573 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 CCDC74BQ96LY2 380 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 FCRL4Q96PJ5 515 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 CDRT15Q96T59 188 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 BRINP2Q9C0B6 783 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 PITHD1Q9GZP4 211 aaPredicted RBP16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 CHRNA10Q9GZZ6 450 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 NT5DC2Q9H857 520 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 SYNPO2LQ9H987 977 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 CCDC167Q9P0B6 97 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 CDV3Q9UKY7 258 aaKnown RBP16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 BTRCQ9Y297 605 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 LRRC42Q9Y546 428 aa16.17■□□□□ 0.18
EXOSC3-203ENST00000465229 TRBC2A0A5B9 178 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 OR1F1O43749 312 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 ANKRD34CP0C6C1 535 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 FTH1P19P0C7X4 201 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 NELFEP18615 380 aaKnown RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 GRK3P35626 688 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 BCL6P41182 706 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 PDX1P52945 283 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 ERVK-8P63133 956 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 HSD11B2P80365 405 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 SIM1P81133 766 aaPredicted RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 CCNIQ14094 377 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 RBBP5Q15291 538 aaKnown RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 MMEL1Q495T6 779 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 CMPK2Q5EBM0 449 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 MED27Q6P2C8 311 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 DHRS13Q6UX07 377 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 RBM44Q6ZP01 1051 aaKnown RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 KMT5CQ86Y97 462 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 LAS2Q8IYD9 372 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 DNAJC22Q8N4W6 341 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 ANKRD53Q8N9V6 530 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 PCYOX1LQ8NBM8 494 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 RCBTB1Q8NDN9 531 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 NPAS2Q99743 824 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 ZNF768Q9H5H4 540 aaKnown RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 S100A14Q9HCY8 104 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 AIG1Q9NVV5 245 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 NDUFAF1Q9Y375 327 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 PCDHGA11Q9Y5H2 935 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 GPR45Q9Y5Y3 372 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 PTGDR2Q9Y5Y4 395 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 A0A0J9YVX5 310 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 FBP2O00757 339 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 HCRTR1O43613 425 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 CDK4P11802 303 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 ANPEPP15144 967 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 ME2P23368 584 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 HMOX2P30519 316 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 NOVA1P51513 510 aaKnown RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 NEK2P51955 445 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 CLDN6P56747 220 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 PSME3P61289 254 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 RPS15AP62244 130 aaKnown RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 RSPO4Q2I0M5 234 aaPredicted RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 SMU1Q2TAY7 513 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 PHF19Q5T6S3 580 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 CDCP2Q5VXM1 449 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 FRG2Q64ET8 278 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 ADNP2Q6IQ32 1131 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 C8orf82Q6P1X6 216 aaPredicted RBP16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 D2HGDHQ8N465 521 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 WDR20Q8TBZ3 569 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 UBE2E3Q969T4 207 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 FRG2BQ96QU4 278 aa16.16■□□□□ 0.18
EXOSC3-203ENST00000465229 OR2A5Q96R48 311 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms