RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SCYL1Q96KG9 808 aa16.75■□□□□ 0.27
VPS52-214ENST00000463486 MKKSQ9NPJ1 570 aaPredicted RBP16.75■□□□□ 0.27
VPS52-214ENST00000463486 PCTPQ9UKL6 214 aa16.75■□□□□ 0.27
VPS52-214ENST00000463486 TMCO1Q9UM00 188 aa16.75■□□□□ 0.27
VPS52-214ENST00000463486 MAN2B2Q9Y2E5 1009 aa16.75■□□□□ 0.27
VPS52-214ENST00000463486 TNPO3Q9Y5L0 923 aaKnown RBP16.75■□□□□ 0.27
VPS52-214ENST00000463486 HS3ST3B1Q9Y662 390 aa16.75■□□□□ 0.27
VPS52-214ENST00000463486 ZNF462Q96JM2 2506 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 COL6A6A6NMZ7 2263 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 PRPF4O43172 522 aaKnown RBP eCLIP16.74■□□□□ 0.27
VPS52-214ENST00000463486 RDH16O75452 317 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 JRKO75564 520 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 DNAJB5O75953 348 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 C1QL1O75973 258 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 BMP10O95393 424 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 SERPIND1P05546 499 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 GSTA1P08263 222 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 RPS17P08708 135 aaKnown RBP16.74■□□□□ 0.27
VPS52-214ENST00000463486 EEF1DP29692 281 aaKnown RBP16.74■□□□□ 0.27
VPS52-214ENST00000463486 OTX2P32243 289 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 RGS1Q08116 209 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 LAPTM5Q13571 262 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 GTF2H2Q13888 395 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 HERC3Q15034 1050 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 GTF2H2CQ6P1K8 395 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 KIRREL2Q6UWL6 708 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 TTLQ8NG68 377 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 OR5T3Q8NGG3 340 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 MIEF2Q96C03 454 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 MS4A6EQ96DS6 147 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 NSUN5Q96P11 429 aaKnown RBP16.74■□□□□ 0.27
VPS52-214ENST00000463486 IPPKQ9H8X2 491 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 ANKHQ9HCJ1 492 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 LGALS13Q9UHV8 139 aa16.74■□□□□ 0.27
VPS52-214ENST00000463486 A0A1B0GTL3 188 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 ARGFXA6NJG6 315 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 SMIM23A6NLE4 172 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 MASP2O00187 686 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 PPP6CO00743 305 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 DLX3O60479 287 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 CEACAM4O75871 244 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 HNF4AP41235 474 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 RAB8AP61006 207 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 OCA2Q04671 838 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 SLC18A2Q05940 514 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 CHAF1BQ13112 559 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 DEFB134Q4QY38 66 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 LIPJQ5W064 366 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 GRHL2Q6ISB3 625 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 RPS27LQ71UM5 84 aaKnown RBP16.73■□□□□ 0.27
VPS52-214ENST00000463486 UBE3DQ7Z6J8 389 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 RAB43Q86YS6 212 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 PRSS58Q8IYP2 241 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 L3MBTL4Q8NA19 623 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 OR7G3Q8NG95 312 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 OR51Q1Q8NH59 317 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 ZNF483Q8TF39 744 aaPredicted RBP16.73■□□□□ 0.27
VPS52-214ENST00000463486 ZNF473Q8WTR7 871 aaKnown RBP16.73■□□□□ 0.27
VPS52-214ENST00000463486 QRFPRQ96P65 431 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 TMEM109Q9BVC6 243 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 ING2Q9H160 280 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 ADNPQ9H2P0 1102 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 MLXIPLQ9NP71 852 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 P4HTMQ9NXG6 502 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 HCN3Q9P1Z3 774 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 DCDC2Q9UHG0 476 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 TUBD1Q9UJT1 453 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 TSC22D4Q9Y3Q8 395 aa16.73■□□□□ 0.27
VPS52-214ENST00000463486 SPENQ96T58 3664 aaKnown RBP16.73■□□□□ 0.27
VPS52-214ENST00000463486 A0A1W2PQ72 361 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 ZNF860A6NHJ4 632 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 IDSB3KWA1 339 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 G3V2L1 256 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 K7EM74 188 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 SMIM24O75264 130 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 PRB1P04280 392 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 TRAF3Q13114 568 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 KCNAB2Q13303 367 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 PAGE2BQ5JRK9 111 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 TOR1AIP1Q5JTV8 583 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 MED25Q71SY5 747 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 OR52B6Q8NGF0 335 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 IP6K3Q96PC2 410 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 CRB3Q9BUF7 120 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 NTMT1Q9BV86 223 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 ROPN1BQ9BZX4 212 aaPredicted RBP16.72■□□□□ 0.27
VPS52-214ENST00000463486 NOL11Q9H8H0 719 aaKnown RBP16.72■□□□□ 0.27
VPS52-214ENST00000463486 ROPN1Q9HAT0 212 aaPredicted RBP16.72■□□□□ 0.27
VPS52-214ENST00000463486 LANCL2Q9NS86 450 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 SEMA3GQ9NS98 782 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 C14orf105Q9NVL8 296 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 C3orf18Q9UK00 162 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 ZNF225Q9UK10 706 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 RNF11Q9Y3C5 154 aa16.72■□□□□ 0.27
VPS52-214ENST00000463486 OR2W5A6NFC9 320 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 H0YIV9 168 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 AGPSO00116 658 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 CHST10O43529 356 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 UGDHO60701 494 aa16.71■□□□□ 0.27
VPS52-214ENST00000463486 PROCP04070 461 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms