RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PIGMQ9H3S5 423 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.29□□□□□ -0.44
C9orf3-211ENST00000463372 SACM1LQ9NTJ5 587 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 TUBA8Q9NY65 449 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-211ENST00000463372 PCDHA13Q9Y5I0 950 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 LRRD1A4D1F6 860 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 SGK494L7N484 410 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 P2RX6O15547 441 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 IL10P22301 178 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 ACRV1P26436 265 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 LOXP28300 417 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-211ENST00000463372 BCL6P41182 706 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
C9orf3-211ENST00000463372 JAM2P57087 298 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 POLR2FP61218 127 aaKnown RBP12.28□□□□□ -0.44
C9orf3-211ENST00000463372 SLC10A2Q12908 348 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-211ENST00000463372 TAF1AQ15573 450 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-211ENST00000463372 ZNF750Q32MQ0 723 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 P3H1Q32P28 736 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 GPR33Q49SQ1 333 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 RNF187Q5TA31 235 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-211ENST00000463372 FAM166AQ6J272 317 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 PPP1R2P3Q6NXS1 205 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 SUSD1Q6UWL2 747 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 PRSS41Q7RTY9 318 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 MILR1Q7Z6M3 343 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 FAM71BQ8TC56 605 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 PEX11GQ96HA9 241 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 MARK4Q96L34 752 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 HS6ST2Q96MM7 605 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 OR2A5Q96R48 311 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 OR1F2PQ96R84 312 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 SYNPO2LQ9H987 977 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 UTP6Q9NYH9 597 aaKnown RBP12.28□□□□□ -0.44
C9orf3-211ENST00000463372 SAMD15Q9P1V8 674 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 RWDD2AQ9UIY3 292 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 CAMK2AQ9UQM7 478 aa12.28□□□□□ -0.44
C9orf3-211ENST00000463372 FAM234BA2RU67 622 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 A8MXE2 369 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 TMCO5BA8MYB1 307 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 OVOL3O00110 214 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 OR2J2O76002 312 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 OR6B1O95007 311 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 IGHV4-39P01824 125 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 P04436 131 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 IL1RNP18510 177 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 CDKN1AP38936 164 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 TRPC1P48995 793 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 LOXL1Q08397 574 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-211ENST00000463372 FAM27E3Q08E93 113 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 FOXF2Q12947 444 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 DPYSL3Q14195 570 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 RTL4Q6ZR62 310 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 TAS2R42Q7RTR8 314 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 SERPINA9Q86WD7 417 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 RASGEF1CQ8N431 466 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 ENOX1Q8TC92 643 aaKnown RBP12.27□□□□□ -0.45
C9orf3-211ENST00000463372 TEKT5Q96M29 485 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 FAM111AQ96PZ2 611 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 CCDC77Q9BR77 488 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 AARSD1Q9BTE6 412 aaKnown RBP12.27□□□□□ -0.45
C9orf3-211ENST00000463372 ACAT2Q9BWD1 397 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 CALHM2Q9HA72 323 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 BARX1Q9HBU1 254 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-211ENST00000463372 MRPS30Q9NP92 439 aaKnown RBP12.27□□□□□ -0.45
C9orf3-211ENST00000463372 ACKR4Q9NPB9 350 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 LANCL2Q9NS86 450 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 INTUQ9ULD6 942 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 WIF1Q9Y5W5 379 aa12.27□□□□□ -0.45
C9orf3-211ENST00000463372 IGHV4-30-2A0A087WSY4 118 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 B4GALT2O60909 372 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 EZRP15311 586 aaKnown RBP12.26□□□□□ -0.45
C9orf3-211ENST00000463372 SOX3P41225 446 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 CDKN1CP49918 316 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-211ENST00000463372 KCNJ2P63252 427 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 TPD52L1Q16890 204 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-211ENST00000463372 SH2D5Q6ZV89 423 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 C9orf106Q8NAJ2 232 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 APCDD1LQ8NCL9 501 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 NFAM1Q8NET5 270 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-211ENST00000463372 TIMP4Q99727 224 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 KRTAP17-1Q9BYP8 105 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 GANQ9H2C0 597 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 ZNF703Q9H7S9 590 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-211ENST00000463372 ANKHQ9HCJ1 492 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 SEMA4BQ9NPR2 832 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-211ENST00000463372 SMARCAL1Q9NZC9 954 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 PCYOX1Q9UHG3 505 aa12.26□□□□□ -0.45
C9orf3-211ENST00000463372 A0A096LNT2 108 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 TMEM89A2RUT3 159 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 C5orf60A6NFR6 353 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 A8MUA0 341 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 RDH16O75452 317 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 IGHV4-31P0DP07 118 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 JAK1P23458 1154 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 SNRPNP63162 240 aaKnown RBP12.25□□□□□ -0.45
C9orf3-211ENST00000463372 CRYZQ08257 329 aaKnown RBP12.25□□□□□ -0.45
C9orf3-211ENST00000463372 HYAL2Q12891 473 aa12.25□□□□□ -0.45
C9orf3-211ENST00000463372 PKP1Q13835 747 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms