RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 CYC1P08574 325 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 SBK3P0C264 359 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 HSD17B3P37058 310 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 SOX8P57073 446 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 MAT1AQ00266 395 aaKnown RBP16.82■□□□□ 0.28
PLOD3-209ENST00000460475 SYT16Q17RD7 645 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 ADPRMQ3LIE5 342 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 PAGE2BQ5JRK9 111 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 DCAF10Q5QP82 559 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 TCTN3Q6NUS6 607 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 EMBQ6PCB8 327 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 KIRREL2Q6UWL6 708 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 ABHD13Q7L211 337 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 VN1R5Q7Z5H4 357 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 ZNF843Q8N446 348 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 C9orf43Q8TAL5 461 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-209ENST00000460475 FER1L6-AS2Q96M78 137 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 AICDAQ9GZX7 198 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 MLXIPLQ9NP71 852 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 CPSF2Q9P2I0 782 aaKnown RBP16.82■□□□□ 0.28
PLOD3-209ENST00000460475 C3orf18Q9UK00 162 aa16.82■□□□□ 0.28
PLOD3-209ENST00000460475 PCDHGA9Q9Y5G4 932 aaKnown RBP16.82■□□□□ 0.28
PLOD3-209ENST00000460475 RP1L1Q8IWN7 2480 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-209ENST00000460475 SCN2AQ99250 2005 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 IDSB3KWA1 339 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 E2F3O00716 465 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 FFAR3O14843 346 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 GPR42O15529 346 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 DNAJB5O75953 348 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 ZNF888P0CJ79 500 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-209ENST00000460475 IL10P22301 178 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 STXBP1P61764 594 aaKnown RBP16.81■□□□□ 0.28
PLOD3-209ENST00000460475 SKP1P63208 163 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 CHAF1BQ13112 559 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 HIST2H2ACQ16777 129 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-209ENST00000460475 DEFB134Q4QY38 66 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 HIST2H2AA3Q6FI13 130 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 SH2D5Q6ZV89 423 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 LAS2Q8IYD9 372 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 TEX9Q8N6V9 391 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 PTGR2Q8N8N7 351 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-209ENST00000460475 OR51Q1Q8NH59 317 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 UBE2E3Q969T4 207 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 SCYL1Q96KG9 808 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 YIPF2Q9BWQ6 316 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 KLHL31Q9H511 634 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 ACSS2Q9NR19 701 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 TBK1Q9UHD2 729 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 TSC22D4Q9Y3Q8 395 aa16.81■□□□□ 0.28
PLOD3-209ENST00000460475 GCN1Q92616 2671 aaKnown RBP16.8■□□□□ 0.28
PLOD3-209ENST00000460475 MYO18BQ8IUG5 2567 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 LRIT2A6NDA9 550 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 ANKDD1BA6NHY2 528 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 LRRC14BA6NHZ5 514 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 UGDHO60701 494 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 SMIM24O75264 130 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 RDH16O75452 317 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 SIX3O95343 332 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-209ENST00000460475 GSTA1P08263 222 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 NUDT17P0C025 328 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 HNF4AP41235 474 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 PIK3CGP48736 1102 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 EMP2P54851 167 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 GTF2H2Q13888 395 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 RBBP7Q16576 425 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 ERCC6LQ2NKX8 1250 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 LIPJQ5W064 366 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 GRHL2Q6ISB3 625 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 GTF2H2CQ6P1K8 395 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 PRSS58Q8IYP2 241 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 OR11G2Q8NGC1 345 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 CAVIN3Q969G5 261 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 MS4A6EQ96DS6 147 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 VPS50Q96JG6 964 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 C1QTNF3Q9BXJ4 246 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 TMEM216Q9P0N5 145 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 HCN3Q9P1Z3 774 aa16.8■□□□□ 0.28
PLOD3-209ENST00000460475 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.8■□□□□ 0.283e-6■■□□□ 11.6
PLOD3-209ENST00000460475 V9GYY5 206 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-209ENST00000460475 C4orf51C9J302 202 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 CDH16O75309 829 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 PYGBP11216 843 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 SERPINB1P30740 379 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 HNRNPH1P31943 449 aaKnown RBP16.79■□□□□ 0.28
PLOD3-209ENST00000460475 HPDP32754 393 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-209ENST00000460475 XCR1P46094 333 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 CCL11P51671 97 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 EFNA3P52797 238 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 TOR1AIP1Q5JTV8 583 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 ADNP2Q6IQ32 1131 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 TMEM205Q6UW68 189 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 GOLGA7Q7Z5G4 137 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 SHISA5Q8N114 240 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 L3MBTL4Q8NA19 623 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 CLEC1AQ8NC01 280 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 OR7G3Q8NG95 312 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 GAL3ST3Q96A11 431 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 PHF21BQ96EK2 531 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 OR1F2PQ96R84 312 aa16.79■□□□□ 0.28
PLOD3-209ENST00000460475 IPPKQ9H8X2 491 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms