RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CXorf40AQ8TE69 158 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 RASSF5Q8WWW0 418 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 STON2Q8WXE9 905 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 OR8D1Q8WZ84 308 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 PROX1Q92786 737 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 ZNF689Q96CS4 500 aaPredicted RBP14.85□□□□□ -0.03
LMNB1-203ENST00000460265 VMP1Q96GC9 406 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 FKBP14Q9NWM8 211 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 SLC25A37Q9NYZ2 338 aa14.85□□□□□ -0.03
LMNB1-203ENST00000460265 FADS2P1A8MWK0 482 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 GSTM2P28161 218 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 CLDN8P56748 225 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 CCBE1Q6UXH8 406 aaPredicted RBP14.84□□□□□ -0.03
LMNB1-203ENST00000460265 ADIPOR2Q86V24 386 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 MFSD4AQ8N468 514 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 OR6Q1Q8NGQ2 317 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 CCM2Q9BSQ5 444 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 SLC29A3Q9BZD2 475 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 REEP1Q9H902 201 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 ZNF451Q9Y4E5 1061 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 KCNK2O95069 426 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 ZNF30P17039 623 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 PRPS1L1P21108 318 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 NFE2L1Q14494 772 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 SLX4IPQ5VYV7 408 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 OR8J3Q8NGG0 315 aa14.84□□□□□ -0.03
LMNB1-203ENST00000460265 ZCCHC2Q9C0B9 1178 aaKnown RBP14.84□□□□□ -0.03
LMNB1-203ENST00000460265 PAQR5Q9NXK6 330 aaPredicted RBP14.84□□□□□ -0.03
LMNB1-203ENST00000460265 K7ESM1 405 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 TCF3P15923 654 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 TNFRSF1BP20333 461 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 PSMB9P28065 219 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 MAT2AP31153 395 aaKnown RBP14.83□□□□□ -0.03
LMNB1-203ENST00000460265 ALDH3A2P51648 485 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 P3H2Q8IVL5 708 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 TAGAPQ8N103 731 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 MCFD2Q8NI22 146 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 ROGDIQ9GZN7 287 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 TPT1P8Q9HAU6 139 aa14.83□□□□□ -0.03
LMNB1-203ENST00000460265 TRBV23OR9-2A0A075B6M9 112 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 XPNPEP2O43895 674 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 PCDH7O60245 1069 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 NPPAP01160 153 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 KLK1P06870 262 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 GTF2E2P29084 291 aaKnown RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 FMO3P31513 532 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 OR1E2P47887 323 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 PRKAG1P54619 331 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 SKIV2LQ15477 1246 aaKnown RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 COLEC12Q5KU26 742 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 PLEKHS1Q5SXH7 462 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 MED27Q6P2C8 311 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 LIPIQ6XZB0 460 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 SPATC1Q76KD6 591 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 PARS2Q7L3T8 475 aaKnown RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 ESX1Q8N693 406 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 HUS1BQ8NHY5 278 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 CMTM7Q96FZ5 175 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 PKP4Q99569 1192 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 RAD9AQ99638 391 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 C6orf62Q9GZU0 229 aaPredicted RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 TOR4AQ9NXH8 423 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 FZD4Q9ULV1 537 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 RUVBL1Q9Y265 456 aaKnown RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 A0A1W2PQ72 361 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 C5orf58C9J3I9 102 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 OLFM2O95897 454 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 PRNPP04156 253 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 IGFBP5P24593 272 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 FCHO2Q0JRZ9 810 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 DPP10Q8N608 796 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 PSD4Q8NDX1 1056 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 NEIL2Q969S2 332 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 DUS3LQ96G46 650 aaKnown RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 TTYH2Q9BSA4 534 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 IL23AQ9NPF7 189 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 STOX2Q9P2F5 926 aaPredicted RBP14.83□□□□□ -0.04
LMNB1-203ENST00000460265 RAB23Q9ULC3 237 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 GMPPBQ9Y5P6 360 aa14.83□□□□□ -0.04
LMNB1-203ENST00000460265 SYNDIG1LA6NDD5 238 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ANKDD1BA6NHY2 528 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ARNTLO00327 626 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 C1QCP02747 245 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 SHMT2P34897 504 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 MC1RQ01726 317 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 CDC20Q12834 499 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 RHOXF1Q8NHV9 184 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 RORBQ92753 470 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 DHRS9Q9BPW9 319 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 CPEB1Q9BZB8 566 aaKnown RBP14.82□□□□□ -0.04
LMNB1-203ENST00000460265 IMP3Q9NV31 184 aaKnown RBP14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ACSL6Q9UKU0 697 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 TRBV5-4A0A0C4DH59 114 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ANTXRLA6NF34 631 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 SNTNA6NMZ2 147 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 RTCAO00442 366 aaKnown RBP14.82□□□□□ -0.04
LMNB1-203ENST00000460265 NUDT7P0C024 238 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 JUPP14923 745 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 SPNP16150 400 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms