RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 NCOR2Q9Y618 2525 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 GUCY1B2O75343 617 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 ITPKBP27987 946 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 GSTM5P46439 218 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 RAP1GDS1P52306 607 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 MTTPP55157 894 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 ZNF844Q08AG5 666 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 LIPMQ5VYY2 423 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 SH2D5Q6ZV89 423 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 PAGE2Q7Z2X7 111 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 APLFQ8IW19 511 aaPredicted RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 ARHGEF39Q8N4T4 335 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 BANPQ8N9N5 519 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 CREB3L4Q8TEY5 395 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 APOBEC4Q8WW27 367 aaKnown RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 MS4A8Q9BY19 250 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 EML4Q9HC35 981 aaKnown RBP10.16□□□□□ -0.78
UBR4-208ENST00000459947 MS4A12Q9NXJ0 267 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 TRPC4Q9UBN4 977 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 PHF11Q9UIL8 331 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 MAN2B2Q9Y2E5 1009 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 PLLPQ9Y342 182 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 WDFY4Q6ZS81 3184 aa10.16□□□□□ -0.78
UBR4-208ENST00000459947 FEZF1A0PJY2 475 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 P2RX6O15547 441 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 ZWINTO95229 277 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 CAPN1P07384 714 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 MMP11P24347 488 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 CLCQ05315 142 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 CUL3Q13618 768 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 NKG7Q16617 165 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 ZNF678Q5SXM1 525 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 GPRIN3Q6ZVF9 776 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 PLD3Q8IV08 490 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 ZNF473Q8WTR7 871 aaKnown RBP10.15□□□□□ -0.78
UBR4-208ENST00000459947 RGMAQ96B86 450 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 PHF21BQ96EK2 531 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 BRF2Q9HAW0 419 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 ADAM29Q9UKF5 820 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 LCMT2O60294 686 aaKnown RBP10.15□□□□□ -0.78
UBR4-208ENST00000459947 SMIM10L1P0DMW3 83 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 PCNAP12004 261 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 PPP2R1BP30154 601 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 HMOX2P30519 316 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 AP5B1Q2VPB7 878 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 TRIM42Q8IWZ5 723 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 GBP7Q8N8V2 638 aaPredicted RBP10.15□□□□□ -0.78
UBR4-208ENST00000459947 UTP15Q8TED0 518 aaKnown RBP10.15□□□□□ -0.78
UBR4-208ENST00000459947 SMIM10Q96HG1 83 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 ARHGAP9Q9BRR9 750 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 ELOVL6Q9H5J4 265 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 VIPAS39Q9H9C1 493 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 LYRM4Q9HD34 91 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 SPTBN2O15020 2390 aa10.15□□□□□ -0.78
UBR4-208ENST00000459947 A0A1W2PPM1 405 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 A0A1W2PQ72 361 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 GOLGA8RI6L899 631 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 HCRTR1O43613 425 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 FOXS1O43638 330 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 DLX3O60479 287 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 TRIM13O60858 407 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 SUPT7LO94864 414 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 SCELO95171 688 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 CSTF3Q12996 717 aaKnown RBP10.15□□□□□ -0.79
UBR4-208ENST00000459947 HKDC1Q2TB90 917 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 C18orf21Q32NC0 220 aaPredicted RBP10.15□□□□□ -0.79
UBR4-208ENST00000459947 AGBL2Q5U5Z8 902 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 SLC38A9Q8NBW4 561 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 ZCCHC10Q8TBK6 192 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 METTL2AQ96IZ6 378 aaKnown RBP10.15□□□□□ -0.79
UBR4-208ENST00000459947 CNDP1Q96KN2 507 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 CRB3Q9BUF7 120 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 NOL11Q9H8H0 719 aaKnown RBP10.15□□□□□ -0.79
UBR4-208ENST00000459947 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 RIC8BQ9NVN3 520 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 ZNF358Q9NW07 568 aa10.15□□□□□ -0.79
UBR4-208ENST00000459947 SERTM1A2A2V5 107 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 NPHS1O60500 1241 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 HEXBP07686 556 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 SLC18A1P54219 525 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 EMP2P54851 167 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 GALNT1Q10472 559 aaPredicted RBP10.14□□□□□ -0.79
UBR4-208ENST00000459947 BEND6Q5SZJ8 279 aaPredicted RBP10.14□□□□□ -0.79
UBR4-208ENST00000459947 C16orf46Q6P387 395 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 COX15Q7KZN9 410 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 HDXQ7Z353 690 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 MYLK4Q86YV6 388 aaPredicted RBP10.14□□□□□ -0.79
UBR4-208ENST00000459947 OR7G3Q8NG95 312 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 STT3BQ8TCJ2 826 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 YIPF2Q9BWQ6 316 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 REXO4Q9GZR2 422 aaKnown RBP10.14□□□□□ -0.79
UBR4-208ENST00000459947 DMRT3Q9NQL9 472 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 ANKRD12Q6UB98 2062 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 A0A0A6YYC8 382 aaPredicted RBP10.14□□□□□ -0.79
UBR4-208ENST00000459947 I3L1I5 382 aaPredicted RBP10.14□□□□□ -0.79
UBR4-208ENST00000459947 CLDN4O14493 209 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 BIRC5O15392 142 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 CRCPO75575 148 aa10.14□□□□□ -0.79
UBR4-208ENST00000459947 CHEK2O96017 543 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms