RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CCDC187A0A096LP49 1063 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 ONECUT2O95948 504 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 TGFB1P01137 390 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 HNRNPH1P31943 449 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 BSGP35613 385 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 MRPL19P49406 292 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 ITGA1P56199 1179 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 VSX2P58304 361 aaPredicted RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 CYP4F2P78329 520 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 EMX2Q04743 252 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 TGM3Q08188 693 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 TUBB3Q13509 450 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 DDX39BQ13838 428 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 KCNAB1Q14722 419 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 DEFB110Q30KQ9 67 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 FAM214AQ32MH5 1076 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 SLC9B1Q4ZJI4 515 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 SPIN4Q56A73 249 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 SGO1Q5FBB7 561 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 C6orf136Q5SQH8 315 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 METTL21CQ5VZV1 264 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 ABHD17CQ6PCB6 329 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 TMPRSS7Q7RTY8 843 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 SPATA21Q7Z572 469 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 UBE3DQ7Z6J8 389 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 ZCCHC7Q8N3Z6 543 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 RNF175Q8N4F7 328 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 OR1L3Q8NH93 324 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 RFWD2Q8NHY2 731 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 UTP15Q8TED0 518 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 C10orf82Q8WW14 230 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 RGMAQ96B86 450 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 MTFMTQ96DP5 389 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 MVB12AQ96EY5 273 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 QRFPRQ96P65 431 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 KCNC2Q96PR1 638 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 HBEGFQ99075 208 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 EBF4Q9BQW3 602 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 TBCDQ9BTW9 1192 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 ROGDIQ9GZN7 287 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 OR51B5Q9H339 312 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 DDX31Q9H8H2 851 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 AKTIPQ9H8T0 292 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 LRTM1Q9HBL6 345 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 LHX9Q9NQ69 397 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 TCF7L2Q9NQB0 619 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 PRDM7Q9NQW5 492 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 RARRES3Q9UL19 164 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 WBP11Q9Y2W2 641 aaKnown RBP10.71□□□□□ -0.69
TRAF4-206ENST00000454852 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 PCDHGA3Q9Y5H0 932 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 PTGDR2Q9Y5Y4 395 aa10.71□□□□□ -0.69
TRAF4-206ENST00000454852 PTPRZ1P23471 2315 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-206ENST00000454852 HYKKA2RU49 373 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 TMEM150CB9EJG8 249 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 PLPP1O14494 284 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 OR2B3O76000 313 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 CTSBP07858 339 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ALOX12P18054 663 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 LBPP18428 481 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 EPHA3P29320 983 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 PLA2G5P39877 138 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 GSTM5P46439 218 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ARFIP2P53365 341 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ARSFP54793 590 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 RAB15P59190 212 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ERVK-8P63133 956 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 HMGCS1Q01581 520 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 MAD2L1Q13257 205 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-206ENST00000454852 HERC3Q15034 1050 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 NR6A1Q15406 480 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 GPR19Q15760 415 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 NDUFA9Q16795 377 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 IMPG1Q17R60 797 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 MUM1Q2TAK8 710 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 HKDC1Q2TB90 917 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 AP5B1Q2VPB7 878 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 LSM12Q3MHD2 195 aaKnown RBP10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ATP6AP1LQ52LC2 224 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 VWA5B1Q5TIE3 1220 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 TRIM40Q6P9F5 258 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 SCIMPQ6UWF3 145 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ACAD11Q709F0 780 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 MED25Q71SY5 747 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ABHD13Q7L211 337 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 SPATA19Q7Z5L4 167 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 NUDT13Q86X67 352 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 GPR135Q8IZ08 494 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 GALNT15Q8N3T1 639 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 ANKS4BQ8N8V4 417 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 TTC29Q8NA56 475 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-206ENST00000454852 KCT2Q8NC54 265 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 WDR36Q8NI36 951 aaKnown RBP10.7□□□□□ -0.7
TRAF4-206ENST00000454852 TUBGCP3Q96CW5 907 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 APIPQ96GX9 242 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 C10orf90Q96M02 699 aa10.7□□□□□ -0.7
TRAF4-206ENST00000454852 TEFMQ96QE5 360 aaKnown RBP10.7□□□□□ -0.7
TRAF4-206ENST00000454852 OR6C1Q96RD1 312 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms