RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SAMD4AQ9UPU9 718 aaKnown RBP13.09□□□□□ -0.31
CLK3-203ENST00000454830 A0A1W2PQF6 199 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 RAB28P51157 221 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 HSPB3Q12988 150 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 LAS2Q8IYD9 372 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 LRRC56Q8IYG6 542 aaPredicted RBP13.08□□□□□ -0.31
CLK3-203ENST00000454830 NAGSQ8N159 534 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 PACRGLQ8N7B6 248 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 OR52E1Q8NGJ3 308 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 LCN9Q8WX39 176 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 CXorf40BQ96DE9 158 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 C17orf62Q9BQA9 187 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 BTBD1Q9H0C5 482 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 PCBD2Q9H0N5 130 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 MAPRE3Q9UPY8 281 aa13.08□□□□□ -0.31
CLK3-203ENST00000454830 FOXE1O00358 373 aaPredicted RBP13.08□□□□□ -0.32
CLK3-203ENST00000454830 ETFAP13804 333 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 HSD17B2P37059 387 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 ARSFP54793 590 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 LRRC32Q14392 662 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLK3-203ENST00000454830 NHSL2Q5HYW2 709 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 ZNF852Q6ZMS4 543 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 MRGPRX1Q96LB2 322 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 OR2M4Q96R27 311 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 CCNDBP1O95273 360 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 LTBRP36941 435 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 PIK3CBP42338 1070 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 MANFP55145 182 aaKnown RBP13.08□□□□□ -0.32
CLK3-203ENST00000454830 LRRC74AQ0VAA2 488 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 DAG1Q14118 895 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
CLK3-203ENST00000454830 ZNF542PQ5EBM4 170 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 KHDRBS2Q5VWX1 349 aaKnown RBP13.08□□□□□ -0.32
CLK3-203ENST00000454830 PAGE2Q7Z2X7 111 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 ZNF551Q7Z340 670 aaPredicted RBP13.08□□□□□ -0.32
CLK3-203ENST00000454830 GALNT5Q7Z7M9 940 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 TRIM48Q8IWZ4 208 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 OXR1Q8N573 874 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 FRMD1Q8N878 549 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 LINC01555Q8NAE3 123 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 OR10G6Q8NH81 332 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 TFAP2CQ92754 450 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.32
CLK3-203ENST00000454830 SLC24A3Q9HC58 644 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 ERVK-11Q9UQG0 969 aa13.08□□□□□ -0.32
CLK3-203ENST00000454830 DNMT3AQ9Y6K1 912 aaPredicted RBP13.08□□□□□ -0.32
CLK3-203ENST00000454830 GLOD5A6NK44 160 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 KCNK5O95279 499 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 PTPN6P29350 595 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 KDELR2P33947 212 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ANKRD34AQ69YU3 496 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 MSANTD1Q6ZTZ1 278 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 SLC9B2Q86UD5 537 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ANKRD53Q8N9V6 530 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 CCL4L1Q8NHW4 92 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 KLHL25Q9H0H3 589 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 KCNK12Q9HB15 430 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ZNF282Q9UDV7 671 aaPredicted RBP13.07□□□□□ -0.32
CLK3-203ENST00000454830 RPS6KA6Q9UK32 745 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 PRSS38A1L453 326 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 H0YJX3 145 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ACOX3O15254 700 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 PPM1DO15297 605 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 SCN2BO60939 215 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ERAL1O75616 437 aaKnown RBP13.07□□□□□ -0.32
CLK3-203ENST00000454830 THRBP10828 461 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 PCSK2P16519 638 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 GPC1P35052 558 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 RPL5P46777 297 aaKnown RBP13.07□□□□□ -0.32
CLK3-203ENST00000454830 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
CLK3-203ENST00000454830 ENPP2Q13822 863 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ARHGAP19Q14CB8 494 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 CYP27C1Q4G0S4 372 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 DEPDC1Q5TB30 811 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ERICH5Q6P6B1 374 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 KIF17Q9P2E2 1029 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 SERTM1A2A2V5 107 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 PLPP1O14494 284 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 H6PDO95479 791 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 RETP07949 1114 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 ACPPP15309 386 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 NDUFV2P19404 249 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 RPL3P39023 403 aaKnown RBP13.07□□□□□ -0.32
CLK3-203ENST00000454830 CAPGP40121 348 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 UAP1L1Q3KQV9 507 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 TMEM26Q6ZUK4 368 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 RNF130Q86XS8 419 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 C11orf65Q8NCR3 313 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 PAPD5Q8NDF8 572 aaKnown RBP13.07□□□□□ -0.32
CLK3-203ENST00000454830 ZNF555Q8NEP9 628 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 OR1E3Q8WZA6 343 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 HSH2DQ96JZ2 352 aa13.07□□□□□ -0.32
CLK3-203ENST00000454830 DPH7Q9BTV6 452 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms