RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 KIF17Q9P2E2 1029 aa12.03□□□□□ -0.48
ECHDC1-209ENST00000454591 POFUT2Q9Y2G5 429 aa12.03□□□□□ -0.48
ECHDC1-209ENST00000454591 PCDHGA6Q9Y5G7 932 aa12.03□□□□□ -0.48
ECHDC1-209ENST00000454591 CORINQ9Y5Q5 1042 aa12.03□□□□□ -0.48
ECHDC1-209ENST00000454591 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
ECHDC1-209ENST00000454591 CEP350Q5VT06 3117 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 hCG_2014768A0A024R1R8 64 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 H3BM21 787 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 CACNB4O00305 520 aaPredicted RBP12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 MAGEB3O15480 346 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 HOXC11O43248 304 aaPredicted RBP12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 SPINT1O43278 529 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 SOD1P00441 154 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 IFNA14P01570 189 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 HNRNPA1P09651 372 aaKnown RBP eCLIP12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 ELFN1P0C7U0 828 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 ARAFP10398 606 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 ITGA2P17301 1181 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 XPAP23025 273 aaPredicted RBP12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 TGFBR2P37173 567 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 OPRL1P41146 370 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 LIMS1P48059 325 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 SERPINB10P48595 397 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 PCBP3P57721 371 aaKnown RBP12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 TBPL1P62380 186 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 HIST2H2ACQ16777 129 aaPredicted RBP12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 DGUOKQ16854 277 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 RGS21Q2M5E4 152 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 ADPRMQ3LIE5 342 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 IFI44LQ53G44 452 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 GCNT6Q5T4J0 391 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 HIST2H2AA3Q6FI13 130 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 PARS2Q7L3T8 475 aaKnown RBP12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 ENTHD1Q8IYW4 607 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 NAGSQ8N159 534 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 CENPSQ8N2Z9 138 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 OXR1Q8N573 874 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 DENND6BQ8NEG7 585 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 TMIEQ8NEW7 156 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 OR4A15Q8NGL6 344 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 OR9A1PQ8NGU1 263 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 RHOXF1Q8NHV9 184 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 MED8Q96G25 268 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 BTBD2Q9BX70 525 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 MROQ9BYG7 248 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 RNF208Q9H0X6 261 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 LINC00597Q9H2U6 94 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 C1GALT1Q9NS00 363 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 EXD2Q9NVH0 621 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 NDUFAF4Q9P032 175 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 PSORS1C1Q9UIG5 152 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 GPR34Q9UPC5 381 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 DYRK1BQ9Y463 629 aa12.02□□□□□ -0.48
ECHDC1-209ENST00000454591 KIAA0355O15063 1070 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PCDHGA12O60330 932 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 FAM20BO75063 409 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 XYLBO75191 536 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 KLHL18O94889 574 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PAPLNO95428 1278 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PRNPP04156 253 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 RHOP08100 348 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 NUDT7P0C024 238 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ERGP11308 486 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ACADLP28330 430 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 IDUAP35475 653 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PREPP48147 710 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 CD97P48960 835 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TUBA1BP68363 451 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ELP6Q0PNE2 266 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 DDX39BQ13838 428 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TOR1AIP1Q5JTV8 583 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ZNF648Q5T619 568 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 NXPE4Q6UWF7 544 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 LCTLQ6UWM7 567 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TUBA1AQ71U36 451 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ARMCX6Q7L4S7 300 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 COMMD6Q7Z4G1 85 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ZNF605Q86T29 641 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 MFSD4AQ8N468 514 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 LILRA3Q8N6C8 439 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 KLHL23Q8NBE8 558 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ZNF540Q8NDQ6 660 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 OR6Q1Q8NGQ2 317 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 C16orf78Q8WTQ4 265 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 SLC38A4Q969I6 547 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ABTB1Q969K4 478 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 CCDC90BQ9GZT6 254 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ENOPH1Q9UHY7 261 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 COQ6Q9Y2Z9 468 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PCDHGA2Q9Y5H1 932 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 NUP214P35658 2090 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 GNG14A0A1W2PPG7 69 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PIPSLA2A3N6 862 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 KPNA4O00629 521 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 AXIN1O15169 862 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PI15O43692 258 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 RFPL2O75678 378 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms