RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 KRT6CP48668 564 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 RPS13P62277 151 aaKnown RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 COL9A2Q14055 689 aaPredicted RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 FAM53BQ14153 422 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 SH2D4BQ5SQS7 431 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 KHDRBS2Q5VWX1 349 aaKnown RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 FOXR1Q6PIV2 292 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 PRSS41Q7RTY9 318 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 TIPARPQ7Z3E1 657 aaKnown RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 PDSS2Q86YH6 399 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 GPR135Q8IZ08 494 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 FAM76AQ8TAV0 307 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 N4BP2L2Q92802 583 aaPredicted RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 MTFMTQ96DP5 389 aaKnown RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 C11orf24Q96F05 449 aaPredicted RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 CMTM7Q96FZ5 175 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 C7orf26Q96N11 449 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 GBP5Q96PP8 586 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 F2RL3Q96RI0 385 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 ACPTQ9BZG2 426 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 ILKAPQ9H0C8 392 aaPredicted RBP13.83□□□□□ -0.2
LAMA4-209ENST00000453937 BRF2Q9HAW0 419 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 SLCO1B3Q9NPD5 702 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 SLC22A11Q9NSA0 550 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 CUTCQ9NTM9 273 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 PNPOQ9NVS9 261 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 PTGDR2Q9Y5Y4 395 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 CEP295Q9C0D2 2601 aa13.83□□□□□ -0.2
LAMA4-209ENST00000453937 ZNF195O14628 629 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 DSCR3O14972 297 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 BRINP1O60477 761 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 ULK1O75385 1050 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 KIAA0754O94854 1291 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 B3GALT4O96024 378 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 NTRK1P04629 796 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 JUNP05412 331 aaKnown RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 NEFHP12036 1026 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 HSD3B1P14060 373 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 PTX3P26022 381 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 HSD3B2P26439 372 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 ARL1P40616 181 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 MDH1P40925 334 aaKnown RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 RPL14P50914 215 aaKnown RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 ARFIP1P53367 373 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 ARSFP54793 590 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 GUCY1A3Q02108 690 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 RGS1Q08116 209 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 TBL3Q12788 808 aaKnown RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 CSTF3Q12996 717 aaKnown RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 IFT88Q13099 833 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 CUL3Q13618 768 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 DDX39BQ13838 428 aaKnown RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 FAM214AQ32MH5 1076 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 XKR7Q5GH72 579 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 TOR1AIP1Q5JTV8 583 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 ABHD17CQ6PCB6 329 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 SCIMPQ6UWF3 145 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 Q6ZSR9 355 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 DTX1Q86Y01 620 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 TMEM126BQ8IUX1 230 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 SHISA5Q8N114 240 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 OR2L5Q8NG80 312 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 SELENOMQ8WWX9 145 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 GATA6Q92908 595 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 GAL3ST3Q96A11 431 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 RNF31Q96EP0 1072 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 HBEGFQ99075 208 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 OR51B5Q9H339 312 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 ELOVL6Q9H5J4 265 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 ACTR5Q9H9F9 607 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 AKIRIN1Q9H9L7 192 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 PRDM7Q9NQW5 492 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 DHCR7Q9UBM7 475 aaKnown RBP13.82□□□□□ -0.2
LAMA4-209ENST00000453937 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
LAMA4-209ENST00000453937 PLPP1O14494 284 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 CPNE3O75131 537 aaKnown RBP13.81□□□□□ -0.2
LAMA4-209ENST00000453937 DNAJB6O75190 326 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 STK17BO94768 372 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 KLHL18O94889 574 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 SCELO95171 688 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 SERPIND1P05546 499 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 ZNF888P0CJ79 500 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-209ENST00000453937 ALOX12P18054 663 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 STXBP1P61764 594 aaKnown RBP13.81□□□□□ -0.2
LAMA4-209ENST00000453937 MAP7Q14244 749 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 MUM1Q2TAK8 710 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 TMEM35AQ53FP2 167 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 SGO1Q5FBB7 561 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 TTC19Q6DKK2 380 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-209ENST00000453937 LCN10Q6JVE6 187 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 ZNF793Q6ZN11 406 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 TTLL10Q6ZVT0 673 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 DSELQ8IZU8 1212 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 GBP7Q8N8V2 638 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-209ENST00000453937 AMER3Q8N944 861 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 TTC29Q8NA56 475 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-209ENST00000453937 OR2T11Q8NH01 316 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 AGR3Q8TD06 166 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 LRRC8CQ8TDW0 803 aa13.81□□□□□ -0.2
LAMA4-209ENST00000453937 CHTF18Q8WVB6 975 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms