RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 FAM214AQ32MH5 1076 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ALKBH6Q3KRA9 238 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 XKR7Q5GH72 579 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 EFHC1Q5JVL4 640 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 LCN1P1Q5VSP4 162 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM53Q6P2H8 277 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM159AQ6UWV7 190 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF704Q6ZNC4 412 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 Q6ZPB1 254 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 DPY19L3Q6ZPD9 716 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 DPPA4Q7L190 304 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 NDUFAF7Q7L592 441 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 LIMS2Q7Z4I7 341 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 NOXA1Q86UR1 476 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 LRRC6Q86X45 466 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 VRK2Q86Y07 508 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CHERPQ8IWX8 916 aaKnown RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 NELFCDQ8IXH7 590 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 MICU2Q8IYU8 434 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 APCDD1Q8J025 514 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CADM3Q8N126 398 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 GALNT16Q8N428 558 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZNF808Q8N4W9 903 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CEP112Q8N8E3 955 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PROKR1Q8TCW9 393 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 SCFD1Q8WVM8 642 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 AKAP1Q92667 903 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 HAS2Q92819 552 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 GGHQ92820 318 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CIDECQ96AQ7 238 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CTHRC1Q96CG8 243 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 LOXL4Q96JB6 756 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PBKQ96KB5 322 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 MARK4Q96L34 752 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 LURAP1Q96LR2 239 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 INPP4AQ96PE3 977 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 TEFMQ96QE5 360 aaKnown RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 VPS35Q96QK1 796 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM110AQ9BQ89 295 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 TRMOQ9BU70 441 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ABHD14AQ9BUJ0 271 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 SSBP3Q9BWW4 388 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ADGRE3Q9BY15 652 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC39A8Q9C0K1 460 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 BICC1Q9H694 974 aaKnown RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 DCLRE1BQ9H816 532 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 HIF1ANQ9NWT6 349 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 AHSPQ9NZD4 102 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 GRHL1Q9NZI5 618 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CTTNBP2NLQ9P2B4 639 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PISDQ9UG56 409 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 AMFRQ9UKV5 643 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 DDX19BQ9UMR2 479 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 FOXJ3Q9UPW0 622 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ERVK-11Q9UQG0 969 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CARMIL1Q5VZK9 1371 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 TRAV26-1A0A087WT03 109 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 IQANK1A0A1B0GTG1 560 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 GOLGA8IPA6NC78 632 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM8BA6NDV4 472 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 NPEPPSL1A6NEC2 478 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 HSPB2A8KAH6 182 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PDZK1P1A8MUH7 402 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 TTC34A8MYJ7 566 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 C9JVG2 144 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 VCYO14598 125 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SSX4O60224 188 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 LRP3O75074 770 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ATP2C2O75185 946 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PMPCBO75439 489 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CNTN5O94779 1100 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CPNE6O95741 557 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SNAI1O95863 264 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 C1RP00736 705 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ERBB2P04626 1255 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CDK4P11802 303 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ETFAP13804 333 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ACO1P21399 889 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PCMT1P22061 227 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 UQCRC2P22695 453 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 MAT2AP31153 395 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 STAT6P42226 847 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 POU3F4P49335 361 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ACADVLP49748 655 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 RAB9AP51151 201 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CLCN5P51795 746 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CHN2P52757 468 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 NUDT6P53370 316 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 MAPK12P53778 367 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 CDH4P55283 916 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 GSDMDP57764 484 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 NLRP11P59045 1033 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 ARPC4P59998 168 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SEC61GP60059 68 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 SNRPEP62304 92 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 BDH1Q02338 343 aa4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPIDQ08752 370 aaKnown RBP4.19□□□□□ -1.74
HMGB3P21-201ENST00000452483 FUT7Q11130 342 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms